Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SCN4AP35499 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.34□□□□□ -1.55
SCN4AP35499 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC5.34□□□□□ -1.55
SCN4AP35499 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC5.34□□□□□ -1.55
SCN4AP35499 TPT1P1-201ENST00000458495 518 ntBASIC5.34□□□□□ -1.55
SCN4AP35499 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SCN4AP35499 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.34□□□□□ -1.56
SCN4AP35499 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
SCN4AP35499 AP001273.1-201ENST00000624493 3152 ntBASIC5.34□□□□□ -1.56
SCN4AP35499 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
SCN4AP35499 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
SCN4AP35499 DHX9P1-201ENST00000436565 3076 ntBASIC5.34□□□□□ -1.56
SCN4AP35499 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
SCN4AP35499 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.34□□□□□ -1.56
SCN4AP35499 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SCN4AP35499 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
SCN4AP35499 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.33□□□□□ -1.56
SCN4AP35499 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SCN4AP35499 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
SCN4AP35499 AC032011.1-201ENST00000611703 1549 ntBASIC5.33□□□□□ -1.56
SCN4AP35499 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
SCN4AP35499 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SCN4AP35499 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SCN4AP35499 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.33□□□□□ -1.56
SCN4AP35499 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
SCN4AP35499 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
SCN4AP35499 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.33□□□□□ -1.56
SCN4AP35499 AL691449.1-201ENST00000426570 421 ntBASIC5.33□□□□□ -1.56
SCN4AP35499 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC5.33□□□□□ -1.56
SCN4AP35499 RPS3AP12-201ENST00000443616 753 ntBASIC5.33□□□□□ -1.56
SCN4AP35499 AL157385.1-201ENST00000446973 268 ntBASIC5.33□□□□□ -1.56
SCN4AP35499 AC093166.2-201ENST00000455969 1017 ntBASIC5.33□□□□□ -1.56
SCN4AP35499 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.33□□□□□ -1.56
SCN4AP35499 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.33□□□□□ -1.56
SCN4AP35499 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.33□□□□□ -1.56
SCN4AP35499 BNIP3P19-201ENST00000605397 577 ntBASIC5.33□□□□□ -1.56
SCN4AP35499 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
SCN4AP35499 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
SCN4AP35499 AC104623.2-202ENST00000623477 4002 ntBASIC5.33□□□□□ -1.56
SCN4AP35499 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SCN4AP35499 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SCN4AP35499 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.33□□□□□ -1.56
SCN4AP35499 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.33□□□□□ -1.56
SCN4AP35499 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC5.32□□□□□ -1.56
SCN4AP35499 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SCN4AP35499 RNA5SP513-201ENST00000364648 118 ntBASIC5.32□□□□□ -1.56
SCN4AP35499 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC5.32□□□□□ -1.56
SCN4AP35499 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SCN4AP35499 AC104333.2-201ENST00000422630 192 ntBASIC5.32□□□□□ -1.56
SCN4AP35499 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.32□□□□□ -1.56
SCN4AP35499 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC5.32□□□□□ -1.56
SCN4AP35499 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.32□□□□□ -1.56
SCN4AP35499 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.32□□□□□ -1.56
SCN4AP35499 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC5.32□□□□□ -1.56
SCN4AP35499 AL451086.1-201ENST00000605596 223 ntBASIC5.32□□□□□ -1.56
SCN4AP35499 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.32□□□□□ -1.56
SCN4AP35499 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SCN4AP35499 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SCN4AP35499 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
SCN4AP35499 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
SCN4AP35499 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SCN4AP35499 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.32□□□□□ -1.56
SCN4AP35499 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
SCN4AP35499 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
SCN4AP35499 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SCN4AP35499 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
SCN4AP35499 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
SCN4AP35499 RNA5SP124-201ENST00000362739 110 ntBASIC5.32□□□□□ -1.56
SCN4AP35499 UBBP2-201ENST00000376781 231 ntBASIC5.32□□□□□ -1.56
SCN4AP35499 U3.35-201ENST00000408405 208 ntBASIC5.32□□□□□ -1.56
SCN4AP35499 AL139095.3-201ENST00000419672 1203 ntBASIC5.32□□□□□ -1.56
SCN4AP35499 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.32□□□□□ -1.56
SCN4AP35499 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.32□□□□□ -1.56
SCN4AP35499 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC5.32□□□□□ -1.56
SCN4AP35499 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.32□□□□□ -1.56
SCN4AP35499 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.32□□□□□ -1.56
SCN4AP35499 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC5.32□□□□□ -1.56
SCN4AP35499 AL157762.1-201ENST00000619612 415 ntBASIC5.32□□□□□ -1.56
SCN4AP35499 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SCN4AP35499 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SCN4AP35499 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SCN4AP35499 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC5.32□□□□□ -1.56
SCN4AP35499 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
SCN4AP35499 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SCN4AP35499 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SCN4AP35499 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.31□□□□□ -1.56
SCN4AP35499 AC092162.3-201ENST00000624511 1624 ntBASIC5.31□□□□□ -1.56
SCN4AP35499 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.31□□□□□ -1.56
SCN4AP35499 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
SCN4AP35499 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SCN4AP35499 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.31□□□□□ -1.56
SCN4AP35499 HSPE1P16-201ENST00000426640 348 ntBASIC5.31□□□□□ -1.56
SCN4AP35499 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SCN4AP35499 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC5.31□□□□□ -1.56
SCN4AP35499 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC5.31□□□□□ -1.56
SCN4AP35499 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC5.31□□□□□ -1.56
SCN4AP35499 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC5.31□□□□□ -1.56
SCN4AP35499 AL049830.4-201ENST00000555149 351 ntBASIC5.31□□□□□ -1.56
SCN4AP35499 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SCN4AP35499 NOL8P1-201ENST00000508336 3529 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms