Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.09□□□□□ -1.59
CHRNA1P02708 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC5.09□□□□□ -1.59
CHRNA1P02708 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CHRNA1P02708 AL049830.4-201ENST00000555149 351 ntBASIC5.09□□□□□ -1.59
CHRNA1P02708 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.09□□□□□ -1.59
CHRNA1P02708 MIR6716-201ENST00000613413 80 ntBASIC5.09□□□□□ -1.59
CHRNA1P02708 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CHRNA1P02708 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CHRNA1P02708 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CHRNA1P02708 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CHRNA1P02708 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.09□□□□□ -1.59
CHRNA1P02708 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.6
CHRNA1P02708 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.09□□□□□ -1.6
CHRNA1P02708 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.09□□□□□ -1.6
CHRNA1P02708 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
CHRNA1P02708 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.6
CHRNA1P02708 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CHRNA1P02708 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.08□□□□□ -1.6
CHRNA1P02708 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CHRNA1P02708 UGT2B26P-201ENST00000508672 1613 ntBASIC5.08□□□□□ -1.6
CHRNA1P02708 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CHRNA1P02708 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.08□□□□□ -1.6
CHRNA1P02708 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CHRNA1P02708 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CHRNA1P02708 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.08□□□□□ -1.6
CHRNA1P02708 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CHRNA1P02708 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CHRNA1P02708 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.08□□□□□ -1.6
CHRNA1P02708 AC025031.4-201ENST00000621248 3271 ntBASIC5.08□□□□□ -1.6
CHRNA1P02708 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CHRNA1P02708 OR1F12-201ENST00000402365 945 ntBASIC5.08□□□□□ -1.6
CHRNA1P02708 RPL21P108-201ENST00000413857 481 ntBASIC5.08□□□□□ -1.6
CHRNA1P02708 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CHRNA1P02708 AL356387.2-201ENST00000422272 243 ntBASIC5.08□□□□□ -1.6
CHRNA1P02708 RPL35AP21-201ENST00000437667 333 ntBASIC5.08□□□□□ -1.6
CHRNA1P02708 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.08□□□□□ -1.6
CHRNA1P02708 CYCSP24-201ENST00000445119 316 ntBASIC5.08□□□□□ -1.6
CHRNA1P02708 RPL23AP24-201ENST00000458203 385 ntBASIC5.08□□□□□ -1.6
CHRNA1P02708 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.08□□□□□ -1.6
CHRNA1P02708 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC5.08□□□□□ -1.6
CHRNA1P02708 AC107918.3-201ENST00000533272 382 ntBASIC5.08□□□□□ -1.6
CHRNA1P02708 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.08□□□□□ -1.6
CHRNA1P02708 MIR3939-201ENST00000582614 106 ntBASIC5.08□□□□□ -1.6
CHRNA1P02708 AC069366.1-201ENST00000583159 838 ntBASIC5.08□□□□□ -1.6
CHRNA1P02708 MIR3138-201ENST00000585238 82 ntBASIC5.08□□□□□ -1.6
CHRNA1P02708 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CHRNA1P02708 AP000648.2-201ENST00000624182 404 ntBASIC5.08□□□□□ -1.6
CHRNA1P02708 AP002967.1-201ENST00000624203 539 ntBASIC5.08□□□□□ -1.6
CHRNA1P02708 AC068724.3-201ENST00000625906 87 ntBASIC5.08□□□□□ -1.6
CHRNA1P02708 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.08□□□□□ -1.6
CHRNA1P02708 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.08□□□□□ -1.6
CHRNA1P02708 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CHRNA1P02708 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.08□□□□□ -1.6
CHRNA1P02708 AC108467.2-201ENST00000617640 1597 ntBASIC5.08□□□□□ -1.6
CHRNA1P02708 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CHRNA1P02708 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.08□□□□□ -1.6
CHRNA1P02708 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
CHRNA1P02708 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
CHRNA1P02708 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CHRNA1P02708 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CHRNA1P02708 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CHRNA1P02708 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
CHRNA1P02708 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
CHRNA1P02708 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CHRNA1P02708 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CHRNA1P02708 OR13C3-201ENST00000374781 1108 ntBASIC5.07□□□□□ -1.6
CHRNA1P02708 RNU6-1263P-201ENST00000384601 106 ntBASIC5.07□□□□□ -1.6
CHRNA1P02708 Z98745.1-201ENST00000402553 494 ntBASIC5.07□□□□□ -1.6
CHRNA1P02708 AL512430.2-201ENST00000406786 339 ntBASIC5.07□□□□□ -1.6
CHRNA1P02708 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.07□□□□□ -1.6
CHRNA1P02708 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.07□□□□□ -1.6
CHRNA1P02708 RPL7P57-201ENST00000423238 740 ntBASIC5.07□□□□□ -1.6
CHRNA1P02708 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.07□□□□□ -1.6
CHRNA1P02708 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.07□□□□□ -1.6
CHRNA1P02708 TPT1P1-201ENST00000458495 518 ntBASIC5.07□□□□□ -1.6
CHRNA1P02708 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.07□□□□□ -1.6
CHRNA1P02708 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.07□□□□□ -1.6
CHRNA1P02708 AP000827.1-201ENST00000527814 258 ntBASIC5.07□□□□□ -1.6
CHRNA1P02708 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CHRNA1P02708 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC5.07□□□□□ -1.6
CHRNA1P02708 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.07□□□□□ -1.6
CHRNA1P02708 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.07□□□□□ -1.6
CHRNA1P02708 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.07□□□□□ -1.6
CHRNA1P02708 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC5.07□□□□□ -1.6
CHRNA1P02708 AC010857.1-201ENST00000606398 594 ntBASIC5.07□□□□□ -1.6
CHRNA1P02708 AC090948.1-201ENST00000607464 549 ntBASIC5.07□□□□□ -1.6
CHRNA1P02708 OR7M1P-201ENST00000608946 533 ntBASIC5.07□□□□□ -1.6
CHRNA1P02708 AL159169.2-201ENST00000610061 1269 ntBASIC5.07□□□□□ -1.6
CHRNA1P02708 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CHRNA1P02708 AL121950.1-201ENST00000624993 2077 ntBASIC5.07□□□□□ -1.6
CHRNA1P02708 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.07□□□□□ -1.6
CHRNA1P02708 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.07□□□□□ -1.6
CHRNA1P02708 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CHRNA1P02708 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CHRNA1P02708 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CHRNA1P02708 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CHRNA1P02708 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CHRNA1P02708 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.07□□□□□ -1.6
CHRNA1P02708 AC125257.1-201ENST00000560400 2930 ntBASIC5.07□□□□□ -1.6
CHRNA1P02708 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms