Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC2.43□□□□□ -2.02
CHKB-CPT1BH3BT56 RPS29P9-201ENST00000440360 171 ntBASIC2.43□□□□□ -2.02
CHKB-CPT1BH3BT56 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC2.43□□□□□ -2.02
CHKB-CPT1BH3BT56 AC005297.1-201ENST00000444765 862 ntBASIC2.43□□□□□ -2.02
CHKB-CPT1BH3BT56 RBMY2AP-201ENST00000445405 1157 ntBASIC2.43□□□□□ -2.02
CHKB-CPT1BH3BT56 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC2.43□□□□□ -2.02
CHKB-CPT1BH3BT56 RBMY2CP-201ENST00000448575 1157 ntBASIC2.43□□□□□ -2.02
CHKB-CPT1BH3BT56 RBMY2DP-202ENST00000448881 1157 ntBASIC2.43□□□□□ -2.02
CHKB-CPT1BH3BT56 RBMY2BP-202ENST00000451071 1156 ntBASIC2.43□□□□□ -2.02
CHKB-CPT1BH3BT56 AL929410.2-201ENST00000451170 189 ntBASIC2.43□□□□□ -2.02
CHKB-CPT1BH3BT56 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC2.43□□□□□ -2.02
CHKB-CPT1BH3BT56 AL606490.1-201ENST00000452266 765 ntBASIC2.43□□□□□ -2.02
CHKB-CPT1BH3BT56 MTND6P32-201ENST00000457611 483 ntBASIC2.43□□□□□ -2.02
CHKB-CPT1BH3BT56 AC004801.2-202ENST00000463559 283 ntBASIC2.43□□□□□ -2.02
CHKB-CPT1BH3BT56 AP002884.2-201ENST00000471647 395 ntBASIC2.43□□□□□ -2.02
CHKB-CPT1BH3BT56 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC2.43□□□□□ -2.02
CHKB-CPT1BH3BT56 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC2.43□□□□□ -2.02
CHKB-CPT1BH3BT56 SNX5P1-201ENST00000505757 1041 ntBASIC2.43□□□□□ -2.02
CHKB-CPT1BH3BT56 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CHKB-CPT1BH3BT56 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC2.43□□□□□ -2.02
CHKB-CPT1BH3BT56 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC2.43□□□□□ -2.02
CHKB-CPT1BH3BT56 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC2.43□□□□□ -2.02
CHKB-CPT1BH3BT56 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC2.43□□□□□ -2.02
CHKB-CPT1BH3BT56 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC2.43□□□□□ -2.02
CHKB-CPT1BH3BT56 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC2.43□□□□□ -2.02
CHKB-CPT1BH3BT56 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC2.43□□□□□ -2.02
CHKB-CPT1BH3BT56 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CHKB-CPT1BH3BT56 MIR4258-201ENST00000580920 91 ntBASIC2.43□□□□□ -2.02
CHKB-CPT1BH3BT56 AC024267.2-201ENST00000582737 417 ntBASIC2.43□□□□□ -2.02
CHKB-CPT1BH3BT56 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC2.43□□□□□ -2.02
CHKB-CPT1BH3BT56 OR7A19P-201ENST00000608051 733 ntBASIC2.43□□□□□ -2.02
CHKB-CPT1BH3BT56 AL135999.3-201ENST00000610501 812 ntBASIC2.43□□□□□ -2.02
CHKB-CPT1BH3BT56 MIR8082-201ENST00000612488 81 ntBASIC2.43□□□□□ -2.02
CHKB-CPT1BH3BT56 AL592295.2-201ENST00000612578 206 ntBASIC2.43□□□□□ -2.02
CHKB-CPT1BH3BT56 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC2.43□□□□□ -2.02
CHKB-CPT1BH3BT56 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC2.43□□□□□ -2.02
CHKB-CPT1BH3BT56 ASB8-218ENST00000629941 278 ntTSL 5 BASIC2.43□□□□□ -2.02
CHKB-CPT1BH3BT56 AC244205.2-202ENST00000635781 342 ntBASIC2.43□□□□□ -2.02
CHKB-CPT1BH3BT56 AC006453.3-201ENST00000635891 377 ntBASIC2.43□□□□□ -2.02
CHKB-CPT1BH3BT56 CASC19-281ENST00000642118 1554 ntBASIC2.43□□□□□ -2.02
CHKB-CPT1BH3BT56 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CHKB-CPT1BH3BT56 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CHKB-CPT1BH3BT56 AF127577.6-201ENST00000623352 2191 ntBASIC2.43□□□□□ -2.02
CHKB-CPT1BH3BT56 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CHKB-CPT1BH3BT56 AC006504.1-201ENST00000562493 3666 ntBASIC2.43□□□□□ -2.02
CHKB-CPT1BH3BT56 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CHKB-CPT1BH3BT56 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CHKB-CPT1BH3BT56 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC2.42□□□□□ -2.02
CHKB-CPT1BH3BT56 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC2.42□□□□□ -2.02
CHKB-CPT1BH3BT56 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
CHKB-CPT1BH3BT56 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
CHKB-CPT1BH3BT56 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC2.42□□□□□ -2.02
CHKB-CPT1BH3BT56 SNORA64.3-201ENST00000365647 134 ntBASIC2.42□□□□□ -2.02
CHKB-CPT1BH3BT56 TINAG-203ENST00000370869 782 ntTSL 3 BASIC2.42□□□□□ -2.02
CHKB-CPT1BH3BT56 SNORA16A-201ENST00000384342 137 ntBASIC2.42□□□□□ -2.02
CHKB-CPT1BH3BT56 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CHKB-CPT1BH3BT56 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC2.42□□□□□ -2.02
CHKB-CPT1BH3BT56 SNORA77-201ENST00000408716 125 ntBASIC2.42□□□□□ -2.02
CHKB-CPT1BH3BT56 RN7SKP108-201ENST00000411367 328 ntBASIC2.42□□□□□ -2.02
CHKB-CPT1BH3BT56 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC2.42□□□□□ -2.02
CHKB-CPT1BH3BT56 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC2.42□□□□□ -2.02
CHKB-CPT1BH3BT56 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC2.42□□□□□ -2.02
CHKB-CPT1BH3BT56 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CHKB-CPT1BH3BT56 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC2.42□□□□□ -2.02
CHKB-CPT1BH3BT56 AC092066.1-201ENST00000425131 317 ntBASIC2.42□□□□□ -2.02
CHKB-CPT1BH3BT56 RPL21P91-201ENST00000429231 479 ntBASIC2.42□□□□□ -2.02
CHKB-CPT1BH3BT56 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC2.42□□□□□ -2.02
CHKB-CPT1BH3BT56 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC2.42□□□□□ -2.02
CHKB-CPT1BH3BT56 PHBP4-201ENST00000437447 837 ntBASIC2.42□□□□□ -2.02
CHKB-CPT1BH3BT56 AL138799.3-201ENST00000438968 350 ntBASIC2.42□□□□□ -2.02
CHKB-CPT1BH3BT56 VN1R110P-201ENST00000438988 971 ntBASIC2.42□□□□□ -2.02
CHKB-CPT1BH3BT56 SCAND3P1-201ENST00000439854 1060 ntBASIC2.42□□□□□ -2.02
CHKB-CPT1BH3BT56 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC2.42□□□□□ -2.02
CHKB-CPT1BH3BT56 EEF1B2P6-201ENST00000445713 673 ntBASIC2.42□□□□□ -2.02
CHKB-CPT1BH3BT56 AC007386.1-201ENST00000455212 582 ntBASIC2.42□□□□□ -2.02
CHKB-CPT1BH3BT56 AC010307.1-201ENST00000467206 836 ntBASIC2.42□□□□□ -2.02
CHKB-CPT1BH3BT56 AC092905.1-201ENST00000467527 949 ntBASIC2.42□□□□□ -2.02
CHKB-CPT1BH3BT56 APOPT1-206ENST00000476323 757 ntTSL 5 BASIC2.42□□□□□ -2.02
CHKB-CPT1BH3BT56 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC2.42□□□□□ -2.02
CHKB-CPT1BH3BT56 AC092451.1-201ENST00000480211 153 ntBASIC2.42□□□□□ -2.02
CHKB-CPT1BH3BT56 AC010350.1-201ENST00000504908 231 ntBASIC2.42□□□□□ -2.02
CHKB-CPT1BH3BT56 PTPN20-221ENST00000509599 945 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CHKB-CPT1BH3BT56 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC2.42□□□□□ -2.02
CHKB-CPT1BH3BT56 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CHKB-CPT1BH3BT56 RNA5SP441-201ENST00000516809 88 ntBASIC2.42□□□□□ -2.02
CHKB-CPT1BH3BT56 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC2.42□□□□□ -2.02
CHKB-CPT1BH3BT56 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC2.42□□□□□ -2.02
CHKB-CPT1BH3BT56 AC015912.2-201ENST00000571053 181 ntBASIC2.42□□□□□ -2.02
CHKB-CPT1BH3BT56 TVP23CP2-201ENST00000571473 623 ntBASIC2.42□□□□□ -2.02
CHKB-CPT1BH3BT56 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC2.42□□□□□ -2.02
CHKB-CPT1BH3BT56 MIR4262-201ENST00000578394 54 ntBASIC2.42□□□□□ -2.02
CHKB-CPT1BH3BT56 AC006270.2-201ENST00000578523 652 ntBASIC2.42□□□□□ -2.02
CHKB-CPT1BH3BT56 AC209154.1-201ENST00000582156 337 ntBASIC2.42□□□□□ -2.02
CHKB-CPT1BH3BT56 AP000919.1-201ENST00000582850 985 ntBASIC2.42□□□□□ -2.02
CHKB-CPT1BH3BT56 EIF1P5-201ENST00000585002 234 ntBASIC2.42□□□□□ -2.02
CHKB-CPT1BH3BT56 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC2.42□□□□□ -2.02
CHKB-CPT1BH3BT56 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC2.42□□□□□ -2.02
CHKB-CPT1BH3BT56 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC2.42□□□□□ -2.02
CHKB-CPT1BH3BT56 AC012368.3-201ENST00000604190 219 ntBASIC2.42□□□□□ -2.02
CHKB-CPT1BH3BT56 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms