Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC4.77□□□□□ -1.65
CGB1A6NKQ9 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
CGB1A6NKQ9 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC4.76□□□□□ -1.65
CGB1A6NKQ9 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC4.76□□□□□ -1.65
CGB1A6NKQ9 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CGB1A6NKQ9 AC000367.1-201ENST00000452711 1766 ntBASIC4.76□□□□□ -1.65
CGB1A6NKQ9 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
CGB1A6NKQ9 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
CGB1A6NKQ9 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CGB1A6NKQ9 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC4.76□□□□□ -1.65
CGB1A6NKQ9 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CGB1A6NKQ9 IL6STP1-201ENST00000346911 1020 ntBASIC4.76□□□□□ -1.65
CGB1A6NKQ9 RNU6-797P-201ENST00000363101 109 ntBASIC4.76□□□□□ -1.65
CGB1A6NKQ9 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CGB1A6NKQ9 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CGB1A6NKQ9 AC136624.1-201ENST00000400791 413 ntBASIC4.76□□□□□ -1.65
CGB1A6NKQ9 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC4.76□□□□□ -1.65
CGB1A6NKQ9 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.76□□□□□ -1.65
CGB1A6NKQ9 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CGB1A6NKQ9 HMGB3P31-201ENST00000413333 595 ntBASIC4.76□□□□□ -1.65
CGB1A6NKQ9 VTA1P1-201ENST00000414044 866 ntBASIC4.76□□□□□ -1.65
CGB1A6NKQ9 TAF13P2-201ENST00000416876 286 ntBASIC4.76□□□□□ -1.65
CGB1A6NKQ9 AL513325.1-201ENST00000417716 1034 ntBASIC4.76□□□□□ -1.65
CGB1A6NKQ9 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC4.76□□□□□ -1.65
CGB1A6NKQ9 NMD3P2-201ENST00000421815 761 ntBASIC4.76□□□□□ -1.65
CGB1A6NKQ9 FAM183DP-201ENST00000421987 399 ntBASIC4.76□□□□□ -1.65
CGB1A6NKQ9 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC4.76□□□□□ -1.65
CGB1A6NKQ9 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC4.76□□□□□ -1.65
CGB1A6NKQ9 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.76□□□□□ -1.65
CGB1A6NKQ9 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CGB1A6NKQ9 RPL21P134-201ENST00000453468 483 ntBASIC4.76□□□□□ -1.65
CGB1A6NKQ9 MTCO3P38-201ENST00000468910 766 ntBASIC4.76□□□□□ -1.65
CGB1A6NKQ9 BNIP3P41-201ENST00000503774 571 ntBASIC4.76□□□□□ -1.65
CGB1A6NKQ9 AC073358.1-201ENST00000505671 684 ntBASIC4.76□□□□□ -1.65
CGB1A6NKQ9 OR7E99P-201ENST00000505750 922 ntBASIC4.76□□□□□ -1.65
CGB1A6NKQ9 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC4.76□□□□□ -1.65
CGB1A6NKQ9 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC4.76□□□□□ -1.65
CGB1A6NKQ9 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC4.76□□□□□ -1.65
CGB1A6NKQ9 IGHVIII-47-1-201ENST00000518187 331 ntBASIC4.76□□□□□ -1.65
CGB1A6NKQ9 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CGB1A6NKQ9 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.76□□□□□ -1.65
CGB1A6NKQ9 OR4R3P-201ENST00000525084 838 ntBASIC4.76□□□□□ -1.65
CGB1A6NKQ9 OR5AZ1P-201ENST00000527448 943 ntBASIC4.76□□□□□ -1.65
CGB1A6NKQ9 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.76□□□□□ -1.65
CGB1A6NKQ9 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC4.76□□□□□ -1.65
CGB1A6NKQ9 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CGB1A6NKQ9 MRPS21P8-201ENST00000569196 235 ntBASIC4.76□□□□□ -1.65
CGB1A6NKQ9 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC4.76□□□□□ -1.65
CGB1A6NKQ9 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.76□□□□□ -1.65
CGB1A6NKQ9 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC4.76□□□□□ -1.65
CGB1A6NKQ9 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CGB1A6NKQ9 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC4.76□□□□□ -1.65
CGB1A6NKQ9 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.76□□□□□ -1.65
CGB1A6NKQ9 AP001267.4-201ENST00000602598 545 ntBASIC4.76□□□□□ -1.65
CGB1A6NKQ9 AC009237.13-201ENST00000603193 276 ntBASIC4.76□□□□□ -1.65
CGB1A6NKQ9 NDUFA8P1-201ENST00000605525 367 ntBASIC4.76□□□□□ -1.65
CGB1A6NKQ9 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC4.76□□□□□ -1.65
CGB1A6NKQ9 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC4.76□□□□□ -1.65
CGB1A6NKQ9 AL451074.6-201ENST00000608512 729 ntBASIC4.76□□□□□ -1.65
CGB1A6NKQ9 AL138960.1-201ENST00000613838 513 ntBASIC4.76□□□□□ -1.65
CGB1A6NKQ9 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC4.76□□□□□ -1.65
CGB1A6NKQ9 AL121873.1-201ENST00000616013 524 ntBASIC4.76□□□□□ -1.65
CGB1A6NKQ9 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.76□□□□□ -1.65
CGB1A6NKQ9 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC4.76□□□□□ -1.65
CGB1A6NKQ9 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC4.76□□□□□ -1.65
CGB1A6NKQ9 AL512652.1-201ENST00000619006 500 ntBASIC4.76□□□□□ -1.65
CGB1A6NKQ9 AC022509.4-201ENST00000621404 572 ntBASIC4.76□□□□□ -1.65
CGB1A6NKQ9 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CGB1A6NKQ9 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CGB1A6NKQ9 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CGB1A6NKQ9 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC4.76□□□□□ -1.65
CGB1A6NKQ9 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CGB1A6NKQ9 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4.76□□□□□ -1.65
CGB1A6NKQ9 THAP12P9-201ENST00000503971 2360 ntBASIC4.76□□□□□ -1.65
CGB1A6NKQ9 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC4.76□□□□□ -1.65
CGB1A6NKQ9 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC4.76□□□□□ -1.65
CGB1A6NKQ9 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CGB1A6NKQ9 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.76□□□□□ -1.65
CGB1A6NKQ9 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CGB1A6NKQ9 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC4.75□□□□□ -1.65
CGB1A6NKQ9 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CGB1A6NKQ9 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
CGB1A6NKQ9 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CGB1A6NKQ9 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CGB1A6NKQ9 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC4.75□□□□□ -1.65
CGB1A6NKQ9 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CGB1A6NKQ9 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CGB1A6NKQ9 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CGB1A6NKQ9 AL359955.1-201ENST00000455242 3275 ntBASIC4.75□□□□□ -1.65
CGB1A6NKQ9 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CGB1A6NKQ9 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CGB1A6NKQ9 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CGB1A6NKQ9 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CGB1A6NKQ9 AC019072.1-201ENST00000604535 1551 ntBASIC4.75□□□□□ -1.65
CGB1A6NKQ9 AC107027.3-201ENST00000565095 3473 ntBASIC4.75□□□□□ -1.65
CGB1A6NKQ9 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC4.75□□□□□ -1.65
CGB1A6NKQ9 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CGB1A6NKQ9 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CGB1A6NKQ9 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CGB1A6NKQ9 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms