Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
SMIM28A0A1B0GU29 OR6C69P-201ENST00000394268 893 ntBASIC4.78□□□□□ -1.64
SMIM28A0A1B0GU29 AC011933.1-201ENST00000413334 321 ntBASIC4.78□□□□□ -1.64
SMIM28A0A1B0GU29 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SMIM28A0A1B0GU29 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SMIM28A0A1B0GU29 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC4.78□□□□□ -1.64
SMIM28A0A1B0GU29 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.78□□□□□ -1.64
SMIM28A0A1B0GU29 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.78□□□□□ -1.64
SMIM28A0A1B0GU29 EIF2S2P3-201ENST00000428356 999 ntBASIC4.78□□□□□ -1.64
SMIM28A0A1B0GU29 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.78□□□□□ -1.64
SMIM28A0A1B0GU29 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.78□□□□□ -1.64
SMIM28A0A1B0GU29 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.78□□□□□ -1.64
SMIM28A0A1B0GU29 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.78□□□□□ -1.64
SMIM28A0A1B0GU29 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC4.78□□□□□ -1.64
SMIM28A0A1B0GU29 RPL7P32-201ENST00000457119 744 ntBASIC4.78□□□□□ -1.64
SMIM28A0A1B0GU29 CYCSP34-201ENST00000458172 304 ntBASIC4.78□□□□□ -1.64
SMIM28A0A1B0GU29 AC116533.1-201ENST00000459748 321 ntBASIC4.78□□□□□ -1.64
SMIM28A0A1B0GU29 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC4.78□□□□□ -1.64
SMIM28A0A1B0GU29 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.78□□□□□ -1.64
SMIM28A0A1B0GU29 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.78□□□□□ -1.64
SMIM28A0A1B0GU29 AC025857.1-201ENST00000525252 377 ntBASIC4.78□□□□□ -1.64
SMIM28A0A1B0GU29 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.78□□□□□ -1.64
SMIM28A0A1B0GU29 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC4.78□□□□□ -1.64
SMIM28A0A1B0GU29 AC008126.1-201ENST00000549019 480 ntBASIC4.78□□□□□ -1.64
SMIM28A0A1B0GU29 PSMB7P1-201ENST00000556349 514 ntBASIC4.78□□□□□ -1.64
SMIM28A0A1B0GU29 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
SMIM28A0A1B0GU29 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.78□□□□□ -1.64
SMIM28A0A1B0GU29 MIR3939-201ENST00000582614 106 ntBASIC4.78□□□□□ -1.64
SMIM28A0A1B0GU29 HMGB2P1-201ENST00000591146 634 ntBASIC4.78□□□□□ -1.64
SMIM28A0A1B0GU29 AC103792.1-201ENST00000603591 919 ntBASIC4.78□□□□□ -1.64
SMIM28A0A1B0GU29 AC113403.1-201ENST00000604910 193 ntBASIC4.78□□□□□ -1.64
SMIM28A0A1B0GU29 uc_338.13-201ENST00000618243 179 ntBASIC4.78□□□□□ -1.64
SMIM28A0A1B0GU29 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
SMIM28A0A1B0GU29 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SMIM28A0A1B0GU29 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
SMIM28A0A1B0GU29 AL133268.1-201ENST00000405676 1401 ntBASIC4.78□□□□□ -1.64
SMIM28A0A1B0GU29 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SMIM28A0A1B0GU29 EIF2AP4-201ENST00000424793 1781 ntBASIC4.78□□□□□ -1.64
SMIM28A0A1B0GU29 AL672167.1-203ENST00000641299 2975 ntBASIC4.77□□□□□ -1.65
SMIM28A0A1B0GU29 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.77□□□□□ -1.65
SMIM28A0A1B0GU29 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SMIM28A0A1B0GU29 AC003985.2-201ENST00000562268 1669 ntBASIC4.77□□□□□ -1.65
SMIM28A0A1B0GU29 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
SMIM28A0A1B0GU29 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SMIM28A0A1B0GU29 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.77□□□□□ -1.65
SMIM28A0A1B0GU29 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.77□□□□□ -1.65
SMIM28A0A1B0GU29 AL035696.2-201ENST00000407941 709 ntBASIC4.77□□□□□ -1.65
SMIM28A0A1B0GU29 SNORA11F-201ENST00000408237 128 ntBASIC4.77□□□□□ -1.65
SMIM28A0A1B0GU29 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.77□□□□□ -1.65
SMIM28A0A1B0GU29 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.77□□□□□ -1.65
SMIM28A0A1B0GU29 EIF4A1P1-201ENST00000420241 934 ntBASIC4.77□□□□□ -1.65
SMIM28A0A1B0GU29 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SMIM28A0A1B0GU29 FTLP19-201ENST00000433300 394 ntBASIC4.77□□□□□ -1.65
SMIM28A0A1B0GU29 UBE2V1P3-201ENST00000439651 417 ntBASIC4.77□□□□□ -1.65
SMIM28A0A1B0GU29 RPL21P133-201ENST00000443666 476 ntBASIC4.77□□□□□ -1.65
SMIM28A0A1B0GU29 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.77□□□□□ -1.65
SMIM28A0A1B0GU29 AL031584.1-201ENST00000447169 754 ntBASIC4.77□□□□□ -1.65
SMIM28A0A1B0GU29 MTND6P5-201ENST00000448266 512 ntBASIC4.77□□□□□ -1.65
SMIM28A0A1B0GU29 MTCYBP14-201ENST00000457471 715 ntBASIC4.77□□□□□ -1.65
SMIM28A0A1B0GU29 RPL23AP37-201ENST00000479658 549 ntBASIC4.77□□□□□ -1.65
SMIM28A0A1B0GU29 AC093267.1-201ENST00000489176 961 ntBASIC4.77□□□□□ -1.65
SMIM28A0A1B0GU29 AL133372.1-201ENST00000493565 745 ntBASIC4.77□□□□□ -1.65
SMIM28A0A1B0GU29 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC4.77□□□□□ -1.65
SMIM28A0A1B0GU29 AC026782.2-201ENST00000510845 636 ntBASIC4.77□□□□□ -1.65
SMIM28A0A1B0GU29 CCNHP1-201ENST00000513311 678 ntBASIC4.77□□□□□ -1.65
SMIM28A0A1B0GU29 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
SMIM28A0A1B0GU29 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.77□□□□□ -1.65
SMIM28A0A1B0GU29 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.77□□□□□ -1.65
SMIM28A0A1B0GU29 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC4.77□□□□□ -1.65
SMIM28A0A1B0GU29 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.77□□□□□ -1.65
SMIM28A0A1B0GU29 RNF138P2-201ENST00000603490 592 ntBASIC4.77□□□□□ -1.65
SMIM28A0A1B0GU29 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.77□□□□□ -1.65
SMIM28A0A1B0GU29 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC4.77□□□□□ -1.65
SMIM28A0A1B0GU29 AC096586.2-201ENST00000610260 441 ntBASIC4.77□□□□□ -1.65
SMIM28A0A1B0GU29 MIR6716-201ENST00000613413 80 ntBASIC4.77□□□□□ -1.65
SMIM28A0A1B0GU29 AC091905.2-201ENST00000623143 306 ntBASIC4.77□□□□□ -1.65
SMIM28A0A1B0GU29 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.77□□□□□ -1.65
SMIM28A0A1B0GU29 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SMIM28A0A1B0GU29 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SMIM28A0A1B0GU29 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SMIM28A0A1B0GU29 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SMIM28A0A1B0GU29 CDC27P2-201ENST00000425026 1922 ntBASIC4.77□□□□□ -1.65
SMIM28A0A1B0GU29 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.77□□□□□ -1.65
SMIM28A0A1B0GU29 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SMIM28A0A1B0GU29 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SMIM28A0A1B0GU29 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
SMIM28A0A1B0GU29 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SMIM28A0A1B0GU29 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SMIM28A0A1B0GU29 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.76□□□□□ -1.65
SMIM28A0A1B0GU29 AC097063.1-201ENST00000426714 1797 ntBASIC4.76□□□□□ -1.65
SMIM28A0A1B0GU29 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SMIM28A0A1B0GU29 RNU1-63P-201ENST00000383902 164 ntBASIC4.76□□□□□ -1.65
SMIM28A0A1B0GU29 U3.23-201ENST00000391132 200 ntBASIC4.76□□□□□ -1.65
SMIM28A0A1B0GU29 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.76□□□□□ -1.65
SMIM28A0A1B0GU29 TPTE2P1-204ENST00000435256 593 ntBASIC4.76□□□□□ -1.65
SMIM28A0A1B0GU29 RPS3AP54-201ENST00000435535 734 ntBASIC4.76□□□□□ -1.65
SMIM28A0A1B0GU29 NPM1P33-201ENST00000438918 872 ntBASIC4.76□□□□□ -1.65
SMIM28A0A1B0GU29 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.76□□□□□ -1.65
SMIM28A0A1B0GU29 AC114495.1-201ENST00000441274 436 ntBASIC4.76□□□□□ -1.65
SMIM28A0A1B0GU29 OR7L1P-201ENST00000456181 380 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms