Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 MGP-201ENST00000228938 694 ntTSL 3 BASIC8.16□□□□□ -1.1
HPS5Q9UPZ3 ENSAP3-201ENST00000312710 333 ntBASIC8.16□□□□□ -1.1
HPS5Q9UPZ3 OR4A15-201ENST00000314706 1035 ntBASIC8.16□□□□□ -1.1
HPS5Q9UPZ3 PARN-201ENST00000341484 2100 ntTSL 2 BASIC8.16□□□□□ -1.1
HPS5Q9UPZ3 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
HPS5Q9UPZ3 RNU5E-8P-201ENST00000363502 116 ntBASIC8.16□□□□□ -1.1
HPS5Q9UPZ3 RN7SKP189-201ENST00000365042 330 ntBASIC8.16□□□□□ -1.1
HPS5Q9UPZ3 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
HPS5Q9UPZ3 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
HPS5Q9UPZ3 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
HPS5Q9UPZ3 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
HPS5Q9UPZ3 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
HPS5Q9UPZ3 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC8.16□□□□□ -1.1
HPS5Q9UPZ3 CACYBPP1-201ENST00000438592 684 ntBASIC8.16□□□□□ -1.1
HPS5Q9UPZ3 GAPDHP37-201ENST00000442317 968 ntBASIC8.16□□□□□ -1.1
HPS5Q9UPZ3 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC8.16□□□□□ -1.1
HPS5Q9UPZ3 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC8.16□□□□□ -1.1
HPS5Q9UPZ3 RNU7-157P-201ENST00000459600 66 ntBASIC8.16□□□□□ -1.1
HPS5Q9UPZ3 RNU6-329P-201ENST00000459618 107 ntBASIC8.16□□□□□ -1.1
HPS5Q9UPZ3 RN7SL101P-201ENST00000496350 279 ntBASIC8.16□□□□□ -1.1
HPS5Q9UPZ3 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC8.16□□□□□ -1.1
HPS5Q9UPZ3 AC048346.1-201ENST00000510247 144 ntBASIC8.16□□□□□ -1.1
HPS5Q9UPZ3 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
HPS5Q9UPZ3 Y_RNA.672-201ENST00000516289 104 ntBASIC8.16□□□□□ -1.1
HPS5Q9UPZ3 IGKV2D-38-201ENST00000518423 240 ntBASIC8.16□□□□□ -1.1
HPS5Q9UPZ3 EEF1B2P2-201ENST00000519625 676 ntBASIC8.16□□□□□ -1.1
HPS5Q9UPZ3 KCTD9P6-201ENST00000522306 950 ntBASIC8.16□□□□□ -1.1
HPS5Q9UPZ3 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC8.16□□□□□ -1.1
HPS5Q9UPZ3 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
HPS5Q9UPZ3 AL109766.1-201ENST00000555080 552 ntBASIC8.16□□□□□ -1.1
HPS5Q9UPZ3 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC8.16□□□□□ -1.1
HPS5Q9UPZ3 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC8.16□□□□□ -1.1
HPS5Q9UPZ3 MTCO2P22-201ENST00000603246 681 ntBASIC8.16□□□□□ -1.1
HPS5Q9UPZ3 AP001330.4-201ENST00000604350 154 ntBASIC8.16□□□□□ -1.1
HPS5Q9UPZ3 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
HPS5Q9UPZ3 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC8.16□□□□□ -1.1
HPS5Q9UPZ3 AC092447.10-201ENST00000620607 1652 ntBASIC8.16□□□□□ -1.1
HPS5Q9UPZ3 AC011815.3-201ENST00000624194 473 ntBASIC8.16□□□□□ -1.1
HPS5Q9UPZ3 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
HPS5Q9UPZ3 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
HPS5Q9UPZ3 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC8.16□□□□□ -1.1
HPS5Q9UPZ3 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
HPS5Q9UPZ3 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
HPS5Q9UPZ3 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
HPS5Q9UPZ3 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
HPS5Q9UPZ3 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
HPS5Q9UPZ3 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC8.16□□□□□ -1.1
HPS5Q9UPZ3 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
HPS5Q9UPZ3 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
HPS5Q9UPZ3 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
HPS5Q9UPZ3 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC8.15□□□□□ -1.1
HPS5Q9UPZ3 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
HPS5Q9UPZ3 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
HPS5Q9UPZ3 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
HPS5Q9UPZ3 MEIS1-202ENST00000398506 3530 ntTSL 5 BASIC8.15□□□□□ -1.1
HPS5Q9UPZ3 AC129502.1-201ENST00000623261 1654 ntBASIC8.15□□□□□ -1.1
HPS5Q9UPZ3 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
HPS5Q9UPZ3 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
HPS5Q9UPZ3 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
HPS5Q9UPZ3 AP000473.2-201ENST00000602659 1537 ntBASIC8.15□□□□□ -1.1
HPS5Q9UPZ3 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC8.15□□□□□ -1.1
HPS5Q9UPZ3 CASC19-221ENST00000641309 1382 ntBASIC8.15□□□□□ -1.1
HPS5Q9UPZ3 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
HPS5Q9UPZ3 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
HPS5Q9UPZ3 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
HPS5Q9UPZ3 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC8.15□□□□□ -1.1
HPS5Q9UPZ3 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
HPS5Q9UPZ3 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
HPS5Q9UPZ3 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
HPS5Q9UPZ3 OR11H13P-201ENST00000359695 979 ntBASIC8.15□□□□□ -1.1
HPS5Q9UPZ3 Y_RNA.381-201ENST00000365666 102 ntBASIC8.15□□□□□ -1.1
HPS5Q9UPZ3 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
HPS5Q9UPZ3 SNORA69-201ENST00000383895 132 ntBASIC8.15□□□□□ -1.1
HPS5Q9UPZ3 RNU6-809P-201ENST00000384461 107 ntBASIC8.15□□□□□ -1.1
HPS5Q9UPZ3 RNY4P36-201ENST00000391116 96 ntBASIC8.15□□□□□ -1.1
HPS5Q9UPZ3 VIM2P-201ENST00000402383 1294 ntBASIC8.15□□□□□ -1.1
HPS5Q9UPZ3 RPS26P13-201ENST00000419030 330 ntBASIC8.15□□□□□ -1.1
HPS5Q9UPZ3 AC008267.5-201ENST00000424928 265 ntBASIC8.15□□□□□ -1.1
HPS5Q9UPZ3 AC005033.1-201ENST00000428904 813 ntBASIC8.15□□□□□ -1.1
HPS5Q9UPZ3 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
HPS5Q9UPZ3 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC8.15□□□□□ -1.1
HPS5Q9UPZ3 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC8.15□□□□□ -1.1
HPS5Q9UPZ3 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC8.15□□□□□ -1.1
HPS5Q9UPZ3 CALM1P2-201ENST00000452941 448 ntBASIC8.15□□□□□ -1.1
HPS5Q9UPZ3 DNAJB5P1-201ENST00000454004 806 ntBASIC8.15□□□□□ -1.1
HPS5Q9UPZ3 AC083806.1-201ENST00000468934 316 ntBASIC8.15□□□□□ -1.1
HPS5Q9UPZ3 AC135999.1-201ENST00000478962 479 ntBASIC8.15□□□□□ -1.1
HPS5Q9UPZ3 AC023194.1-201ENST00000493084 308 ntBASIC8.15□□□□□ -1.1
HPS5Q9UPZ3 AC021146.1-201ENST00000511202 716 ntBASIC8.15□□□□□ -1.1
HPS5Q9UPZ3 RPL7L1P4-201ENST00000513004 707 ntBASIC8.15□□□□□ -1.1
HPS5Q9UPZ3 RNU4-49P-201ENST00000516080 140 ntBASIC8.15□□□□□ -1.1
HPS5Q9UPZ3 IGLVV-66-201ENST00000523818 341 ntBASIC8.15□□□□□ -1.1
HPS5Q9UPZ3 COPS8P3-201ENST00000526024 482 ntBASIC8.15□□□□□ -1.1
HPS5Q9UPZ3 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC8.15□□□□□ -1.1
HPS5Q9UPZ3 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC8.15□□□□□ -1.1
HPS5Q9UPZ3 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC8.15□□□□□ -1.1
HPS5Q9UPZ3 AL163153.1-201ENST00000554223 283 ntBASIC8.15□□□□□ -1.1
HPS5Q9UPZ3 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC8.15□□□□□ -1.1
HPS5Q9UPZ3 MIR4680-201ENST00000580906 66 ntBASIC8.15□□□□□ -1.1
HPS5Q9UPZ3 AC111186.1-201ENST00000604684 130 ntBASIC8.15□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms