Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.48□□□□□ -1.53
BLOC1S4Q9NUP1 AC018552.3-201ENST00000567416 561 ntBASIC5.48□□□□□ -1.53
BLOC1S4Q9NUP1 TVP23CP2-201ENST00000571473 623 ntBASIC5.48□□□□□ -1.53
BLOC1S4Q9NUP1 AC002069.2-201ENST00000603580 883 ntBASIC5.48□□□□□ -1.53
BLOC1S4Q9NUP1 AC243654.2-201ENST00000612843 443 ntBASIC5.48□□□□□ -1.53
BLOC1S4Q9NUP1 AC037198.3-201ENST00000616754 526 ntBASIC5.48□□□□□ -1.53
BLOC1S4Q9NUP1 AC097460.3-201ENST00000623099 442 ntBASIC5.48□□□□□ -1.53
BLOC1S4Q9NUP1 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC5.48□□□□□ -1.53
BLOC1S4Q9NUP1 AC015726.3-201ENST00000624501 418 ntBASIC5.48□□□□□ -1.53
BLOC1S4Q9NUP1 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
BLOC1S4Q9NUP1 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
BLOC1S4Q9NUP1 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
BLOC1S4Q9NUP1 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
BLOC1S4Q9NUP1 AL022311.1-201ENST00000623726 19416 ntBASIC5.48□□□□□ -1.53
BLOC1S4Q9NUP1 AC090971.4-201ENST00000560291 1800 ntBASIC5.48□□□□□ -1.53
BLOC1S4Q9NUP1 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
BLOC1S4Q9NUP1 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
BLOC1S4Q9NUP1 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
BLOC1S4Q9NUP1 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
BLOC1S4Q9NUP1 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
BLOC1S4Q9NUP1 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
BLOC1S4Q9NUP1 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.47□□□□□ -1.53
BLOC1S4Q9NUP1 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.47□□□□□ -1.53
BLOC1S4Q9NUP1 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.47□□□□□ -1.53
BLOC1S4Q9NUP1 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
BLOC1S4Q9NUP1 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
BLOC1S4Q9NUP1 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.47□□□□□ -1.53
BLOC1S4Q9NUP1 OR6K3-202ENST00000368146 996 ntBASIC5.47□□□□□ -1.53
BLOC1S4Q9NUP1 SNORA70-201ENST00000384436 135 ntBASIC5.47□□□□□ -1.53
BLOC1S4Q9NUP1 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
BLOC1S4Q9NUP1 PEX12P1-201ENST00000400284 1048 ntBASIC5.47□□□□□ -1.53
BLOC1S4Q9NUP1 AL109941.1-201ENST00000401925 229 ntBASIC5.47□□□□□ -1.53
BLOC1S4Q9NUP1 CHEK2P3-201ENST00000416118 248 ntBASIC5.47□□□□□ -1.53
BLOC1S4Q9NUP1 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.47□□□□□ -1.53
BLOC1S4Q9NUP1 NPM1P24-201ENST00000428039 894 ntBASIC5.47□□□□□ -1.53
BLOC1S4Q9NUP1 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.47□□□□□ -1.53
BLOC1S4Q9NUP1 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC5.47□□□□□ -1.53
BLOC1S4Q9NUP1 RPL6P5-201ENST00000445678 828 ntBASIC5.47□□□□□ -1.53
BLOC1S4Q9NUP1 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.47□□□□□ -1.53
BLOC1S4Q9NUP1 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.47□□□□□ -1.53
BLOC1S4Q9NUP1 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC5.47□□□□□ -1.53
BLOC1S4Q9NUP1 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
BLOC1S4Q9NUP1 AC027308.1-201ENST00000517993 110 ntBASIC5.47□□□□□ -1.53
BLOC1S4Q9NUP1 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC5.47□□□□□ -1.53
BLOC1S4Q9NUP1 MORF4L1P3-201ENST00000525966 950 ntBASIC5.47□□□□□ -1.53
BLOC1S4Q9NUP1 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.47□□□□□ -1.53
BLOC1S4Q9NUP1 AC025260.1-201ENST00000548858 430 ntBASIC5.47□□□□□ -1.53
BLOC1S4Q9NUP1 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.47□□□□□ -1.53
BLOC1S4Q9NUP1 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC5.47□□□□□ -1.53
BLOC1S4Q9NUP1 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.47□□□□□ -1.53
BLOC1S4Q9NUP1 AC010424.2-201ENST00000607594 443 ntBASIC5.47□□□□□ -1.53
BLOC1S4Q9NUP1 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.47□□□□□ -1.53
BLOC1S4Q9NUP1 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.47□□□□□ -1.53
BLOC1S4Q9NUP1 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC5.47□□□□□ -1.53
BLOC1S4Q9NUP1 THAP12P5-201ENST00000405864 2275 ntBASIC5.47□□□□□ -1.53
BLOC1S4Q9NUP1 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
BLOC1S4Q9NUP1 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
BLOC1S4Q9NUP1 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
BLOC1S4Q9NUP1 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
BLOC1S4Q9NUP1 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.47□□□□□ -1.53
BLOC1S4Q9NUP1 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.47□□□□□ -1.53
BLOC1S4Q9NUP1 AL022393.1-201ENST00000625142 1677 ntBASIC5.47□□□□□ -1.53
BLOC1S4Q9NUP1 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
BLOC1S4Q9NUP1 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.46□□□□□ -1.53
BLOC1S4Q9NUP1 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
BLOC1S4Q9NUP1 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.53
BLOC1S4Q9NUP1 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
BLOC1S4Q9NUP1 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
BLOC1S4Q9NUP1 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
BLOC1S4Q9NUP1 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
BLOC1S4Q9NUP1 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.46□□□□□ -1.54
BLOC1S4Q9NUP1 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
BLOC1S4Q9NUP1 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC5.46□□□□□ -1.54
BLOC1S4Q9NUP1 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
BLOC1S4Q9NUP1 Z97832.1-201ENST00000402490 328 ntBASIC5.46□□□□□ -1.54
BLOC1S4Q9NUP1 TCEA1P4-201ENST00000415066 844 ntBASIC5.46□□□□□ -1.54
BLOC1S4Q9NUP1 TMBIM7P-201ENST00000418074 855 ntBASIC5.46□□□□□ -1.54
BLOC1S4Q9NUP1 AL645608.4-201ENST00000423619 154 ntBASIC5.46□□□□□ -1.54
BLOC1S4Q9NUP1 PNRC2P1-201ENST00000423940 420 ntBASIC5.46□□□□□ -1.54
BLOC1S4Q9NUP1 AL158073.1-201ENST00000426848 1104 ntBASIC5.46□□□□□ -1.54
BLOC1S4Q9NUP1 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.46□□□□□ -1.54
BLOC1S4Q9NUP1 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.46□□□□□ -1.54
BLOC1S4Q9NUP1 PTMAP6-201ENST00000439110 327 ntBASIC5.46□□□□□ -1.54
BLOC1S4Q9NUP1 RNFT1P2-201ENST00000443064 757 ntBASIC5.46□□□□□ -1.54
BLOC1S4Q9NUP1 AC004453.1-201ENST00000487895 408 ntBASIC5.46□□□□□ -1.54
BLOC1S4Q9NUP1 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
BLOC1S4Q9NUP1 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
BLOC1S4Q9NUP1 OR5M14P-201ENST00000506803 618 ntBASIC5.46□□□□□ -1.54
BLOC1S4Q9NUP1 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
BLOC1S4Q9NUP1 SMARCE1P4-201ENST00000523647 241 ntBASIC5.46□□□□□ -1.54
BLOC1S4Q9NUP1 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.46□□□□□ -1.54
BLOC1S4Q9NUP1 AC107918.3-201ENST00000533272 382 ntBASIC5.46□□□□□ -1.54
BLOC1S4Q9NUP1 AC008033.2-201ENST00000542626 177 ntBASIC5.46□□□□□ -1.54
BLOC1S4Q9NUP1 AL049839.1-201ENST00000556151 657 ntBASIC5.46□□□□□ -1.54
BLOC1S4Q9NUP1 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.46□□□□□ -1.54
BLOC1S4Q9NUP1 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.46□□□□□ -1.54
BLOC1S4Q9NUP1 CYCSP40-201ENST00000575927 294 ntBASIC5.46□□□□□ -1.54
BLOC1S4Q9NUP1 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.46□□□□□ -1.54
BLOC1S4Q9NUP1 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC5.46□□□□□ -1.54
BLOC1S4Q9NUP1 AC087783.2-201ENST00000605070 562 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms