Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
SSU72Q9NP77 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.25□□□□□ -1.41
SSU72Q9NP77 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SSU72Q9NP77 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SSU72Q9NP77 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
SSU72Q9NP77 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.25□□□□□ -1.41
SSU72Q9NP77 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.25□□□□□ -1.41
SSU72Q9NP77 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
SSU72Q9NP77 Y_RNA.89-201ENST00000363031 102 ntBASIC6.25□□□□□ -1.41
SSU72Q9NP77 Y_RNA.263-201ENST00000364659 114 ntBASIC6.25□□□□□ -1.41
SSU72Q9NP77 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.25□□□□□ -1.41
SSU72Q9NP77 EI24P3-201ENST00000399046 1062 ntBASIC6.25□□□□□ -1.41
SSU72Q9NP77 ERMN-204ENST00000409925 556 ntTSL 4 BASIC6.25□□□□□ -1.41
SSU72Q9NP77 AC109780.2-201ENST00000413467 845 ntBASIC6.25□□□□□ -1.41
SSU72Q9NP77 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.25□□□□□ -1.41
SSU72Q9NP77 USP9YP20-201ENST00000419224 558 ntBASIC6.25□□□□□ -1.41
SSU72Q9NP77 AHCYP8-201ENST00000425108 209 ntBASIC6.25□□□□□ -1.41
SSU72Q9NP77 ZYG11AP1-201ENST00000430329 837 ntBASIC6.25□□□□□ -1.41
SSU72Q9NP77 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC6.25□□□□□ -1.41
SSU72Q9NP77 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
SSU72Q9NP77 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SSU72Q9NP77 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC6.25□□□□□ -1.41
SSU72Q9NP77 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SSU72Q9NP77 BX322784.1-201ENST00000455793 1077 ntBASIC6.25□□□□□ -1.41
SSU72Q9NP77 PDPN-205ENST00000487038 607 ntTSL 2 BASIC6.25□□□□□ -1.41
SSU72Q9NP77 NDUFB4P2-201ENST00000509515 391 ntBASIC6.25□□□□□ -1.41
SSU72Q9NP77 RPL7L1P7-201ENST00000509986 724 ntBASIC6.25□□□□□ -1.41
SSU72Q9NP77 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SSU72Q9NP77 AC239860.2-201ENST00000525886 270 ntBASIC6.25□□□□□ -1.41
SSU72Q9NP77 CENPUP1-201ENST00000526649 1202 ntBASIC6.25□□□□□ -1.41
SSU72Q9NP77 OR5AP1P-201ENST00000529730 940 ntBASIC6.25□□□□□ -1.41
SSU72Q9NP77 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.25□□□□□ -1.41
SSU72Q9NP77 RPL3P13-201ENST00000550415 216 ntBASIC6.25□□□□□ -1.41
SSU72Q9NP77 TRAV15-201ENST00000556680 249 ntBASIC6.25□□□□□ -1.41
SSU72Q9NP77 AC138915.2-201ENST00000569776 97 ntBASIC6.25□□□□□ -1.41
SSU72Q9NP77 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.25□□□□□ -1.41
SSU72Q9NP77 MTCO3P13-201ENST00000577757 781 ntBASIC6.25□□□□□ -1.41
SSU72Q9NP77 MIR5697-201ENST00000578045 78 ntBASIC6.25□□□□□ -1.41
SSU72Q9NP77 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC6.25□□□□□ -1.41
SSU72Q9NP77 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC6.25□□□□□ -1.41
SSU72Q9NP77 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC6.25□□□□□ -1.41
SSU72Q9NP77 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC6.25□□□□□ -1.41
SSU72Q9NP77 AC008277.2-201ENST00000605196 797 ntBASIC6.25□□□□□ -1.41
SSU72Q9NP77 AC095038.1-201ENST00000429248 1591 ntBASIC6.25□□□□□ -1.41
SSU72Q9NP77 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.25□□□□□ -1.41
SSU72Q9NP77 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
SSU72Q9NP77 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SSU72Q9NP77 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.25□□□□□ -1.41
SSU72Q9NP77 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.25□□□□□ -1.41
SSU72Q9NP77 CASC19-260ENST00000641828 2001 ntBASIC6.25□□□□□ -1.41
SSU72Q9NP77 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
SSU72Q9NP77 RARSP1-201ENST00000542842 1418 ntBASIC6.25□□□□□ -1.41
SSU72Q9NP77 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
SSU72Q9NP77 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SSU72Q9NP77 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
SSU72Q9NP77 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
SSU72Q9NP77 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SSU72Q9NP77 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.24□□□□□ -1.41
SSU72Q9NP77 AC117529.2-201ENST00000512159 2068 ntBASIC6.24□□□□□ -1.41
SSU72Q9NP77 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SSU72Q9NP77 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SSU72Q9NP77 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.24□□□□□ -1.41
SSU72Q9NP77 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SSU72Q9NP77 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.24□□□□□ -1.41
SSU72Q9NP77 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC6.24□□□□□ -1.41
SSU72Q9NP77 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
SSU72Q9NP77 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.24□□□□□ -1.41
SSU72Q9NP77 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
SSU72Q9NP77 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.24□□□□□ -1.41
SSU72Q9NP77 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SSU72Q9NP77 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
SSU72Q9NP77 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
SSU72Q9NP77 Y_RNA.295-201ENST00000364918 102 ntBASIC6.24□□□□□ -1.41
SSU72Q9NP77 RNA5SP355-201ENST00000365317 135 ntBASIC6.24□□□□□ -1.41
SSU72Q9NP77 TRMT13-203ENST00000370143 476 ntTSL 3 BASIC6.24□□□□□ -1.41
SSU72Q9NP77 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SSU72Q9NP77 MT-TD-201ENST00000387419 68 ntBASIC6.24□□□□□ -1.41
SSU72Q9NP77 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
SSU72Q9NP77 RN7SKP281-201ENST00000410472 352 ntBASIC6.24□□□□□ -1.41
SSU72Q9NP77 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC6.24□□□□□ -1.41
SSU72Q9NP77 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
SSU72Q9NP77 NPM1P24-201ENST00000428039 894 ntBASIC6.24□□□□□ -1.41
SSU72Q9NP77 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC6.24□□□□□ -1.41
SSU72Q9NP77 AL451074.3-201ENST00000437709 472 ntBASIC6.24□□□□□ -1.41
SSU72Q9NP77 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC6.24□□□□□ -1.41
SSU72Q9NP77 AL831737.1-201ENST00000441288 271 ntBASIC6.24□□□□□ -1.41
SSU72Q9NP77 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.24□□□□□ -1.41
SSU72Q9NP77 PRELID1P3-201ENST00000450055 643 ntBASIC6.24□□□□□ -1.41
SSU72Q9NP77 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC6.24□□□□□ -1.41
SSU72Q9NP77 DNAJB5P1-201ENST00000454004 806 ntBASIC6.24□□□□□ -1.41
SSU72Q9NP77 SNRPFP4-201ENST00000456366 242 ntBASIC6.24□□□□□ -1.41
SSU72Q9NP77 HNRNPDLP3-201ENST00000456745 380 ntBASIC6.24□□□□□ -1.41
SSU72Q9NP77 RPL38P1-201ENST00000460914 211 ntBASIC6.24□□□□□ -1.41
SSU72Q9NP77 RPL5P15-201ENST00000475870 897 ntBASIC6.24□□□□□ -1.41
SSU72Q9NP77 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC6.24□□□□□ -1.41
SSU72Q9NP77 AC099521.1-201ENST00000482557 334 ntBASIC6.24□□□□□ -1.41
SSU72Q9NP77 RPS3AP14-201ENST00000483907 780 ntBASIC6.24□□□□□ -1.41
SSU72Q9NP77 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.24□□□□□ -1.41
SSU72Q9NP77 LINC01182-201ENST00000503532 582 ntTSL 4 BASIC6.24□□□□□ -1.41
SSU72Q9NP77 MTND5P5-201ENST00000503764 376 ntBASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms