Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 AC004241.3-201ENST00000611728 517 ntBASIC4.85□□□□□ -1.63
RPRD1AQ96P16 AC015922.4-201ENST00000612568 690 ntBASIC4.85□□□□□ -1.63
RPRD1AQ96P16 MIR6780A-201ENST00000615089 68 ntBASIC4.85□□□□□ -1.63
RPRD1AQ96P16 AC131238.1-201ENST00000617135 328 ntBASIC4.85□□□□□ -1.63
RPRD1AQ96P16 AC015804.1-201ENST00000622935 435 ntBASIC4.85□□□□□ -1.63
RPRD1AQ96P16 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.85□□□□□ -1.63
RPRD1AQ96P16 AL359922.3-201ENST00000624779 1670 ntBASIC4.85□□□□□ -1.63
RPRD1AQ96P16 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.85□□□□□ -1.63
RPRD1AQ96P16 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RPRD1AQ96P16 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RPRD1AQ96P16 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.85□□□□□ -1.63
RPRD1AQ96P16 ZFRP1-201ENST00000457579 2970 ntBASIC4.85□□□□□ -1.63
RPRD1AQ96P16 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.85□□□□□ -1.63
RPRD1AQ96P16 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.85□□□□□ -1.63
RPRD1AQ96P16 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RPRD1AQ96P16 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RPRD1AQ96P16 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RPRD1AQ96P16 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
RPRD1AQ96P16 AL731532.2-201ENST00000623542 1953 ntBASIC4.84□□□□□ -1.63
RPRD1AQ96P16 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.63
RPRD1AQ96P16 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RPRD1AQ96P16 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RPRD1AQ96P16 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.84□□□□□ -1.63
RPRD1AQ96P16 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.84□□□□□ -1.63
RPRD1AQ96P16 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.84□□□□□ -1.63
RPRD1AQ96P16 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.84□□□□□ -1.63
RPRD1AQ96P16 RPS16P5-201ENST00000406501 404 ntBASIC4.84□□□□□ -1.63
RPRD1AQ96P16 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.84□□□□□ -1.63
RPRD1AQ96P16 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.84□□□□□ -1.63
RPRD1AQ96P16 RPL10P17-201ENST00000453852 316 ntBASIC4.84□□□□□ -1.63
RPRD1AQ96P16 AC010326.1-201ENST00000462726 602 ntBASIC4.84□□□□□ -1.63
RPRD1AQ96P16 RN7SL354P-201ENST00000469282 294 ntBASIC4.84□□□□□ -1.63
RPRD1AQ96P16 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.84□□□□□ -1.63
RPRD1AQ96P16 AC008897.1-201ENST00000494006 347 ntBASIC4.84□□□□□ -1.63
RPRD1AQ96P16 AC025164.1-201ENST00000496249 478 ntBASIC4.84□□□□□ -1.63
RPRD1AQ96P16 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
RPRD1AQ96P16 HMGB3P16-201ENST00000508037 287 ntBASIC4.84□□□□□ -1.63
RPRD1AQ96P16 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.84□□□□□ -1.63
RPRD1AQ96P16 snoU109.6-201ENST00000516831 118 ntBASIC4.84□□□□□ -1.63
RPRD1AQ96P16 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.84□□□□□ -1.63
RPRD1AQ96P16 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.84□□□□□ -1.63
RPRD1AQ96P16 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.84□□□□□ -1.63
RPRD1AQ96P16 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.84□□□□□ -1.63
RPRD1AQ96P16 MIR6820-201ENST00000611508 62 ntBASIC4.84□□□□□ -1.63
RPRD1AQ96P16 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.84□□□□□ -1.63
RPRD1AQ96P16 AC022106.2-201ENST00000620114 757 ntBASIC4.84□□□□□ -1.63
RPRD1AQ96P16 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.84□□□□□ -1.63
RPRD1AQ96P16 AL356489.2-201ENST00000566968 3528 ntBASIC4.84□□□□□ -1.63
RPRD1AQ96P16 AC015813.6-201ENST00000624409 5808 ntBASIC4.84□□□□□ -1.63
RPRD1AQ96P16 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
RPRD1AQ96P16 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
RPRD1AQ96P16 NEAT1-202ENST00000501122 22743 ntBASIC4.84□□□□□ -1.64
RPRD1AQ96P16 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RPRD1AQ96P16 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RPRD1AQ96P16 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
RPRD1AQ96P16 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
RPRD1AQ96P16 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RPRD1AQ96P16 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RPRD1AQ96P16 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
RPRD1AQ96P16 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
RPRD1AQ96P16 AP000580.1-201ENST00000404439 358 ntBASIC4.83□□□□□ -1.64
RPRD1AQ96P16 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.83□□□□□ -1.64
RPRD1AQ96P16 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.83□□□□□ -1.64
RPRD1AQ96P16 AC073136.2-201ENST00000417282 849 ntBASIC4.83□□□□□ -1.64
RPRD1AQ96P16 CYCSP10-201ENST00000417973 294 ntBASIC4.83□□□□□ -1.64
RPRD1AQ96P16 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.83□□□□□ -1.64
RPRD1AQ96P16 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.83□□□□□ -1.64
RPRD1AQ96P16 AL359265.2-201ENST00000434367 631 ntBASIC4.83□□□□□ -1.64
RPRD1AQ96P16 AL157385.1-201ENST00000446973 268 ntBASIC4.83□□□□□ -1.64
RPRD1AQ96P16 PTMAP3-201ENST00000447474 330 ntBASIC4.83□□□□□ -1.64
RPRD1AQ96P16 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.83□□□□□ -1.64
RPRD1AQ96P16 AL513533.1-201ENST00000453728 415 ntBASIC4.83□□□□□ -1.64
RPRD1AQ96P16 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.83□□□□□ -1.64
RPRD1AQ96P16 AC022336.1-201ENST00000475510 337 ntBASIC4.83□□□□□ -1.64
RPRD1AQ96P16 RPL23AP72-201ENST00000492447 435 ntBASIC4.83□□□□□ -1.64
RPRD1AQ96P16 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.83□□□□□ -1.64
RPRD1AQ96P16 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC4.83□□□□□ -1.64
RPRD1AQ96P16 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.83□□□□□ -1.64
RPRD1AQ96P16 AC104785.1-201ENST00000603220 588 ntBASIC4.83□□□□□ -1.64
RPRD1AQ96P16 AC119501.1-201ENST00000603646 475 ntBASIC4.83□□□□□ -1.64
RPRD1AQ96P16 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
RPRD1AQ96P16 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.83□□□□□ -1.64
RPRD1AQ96P16 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.83□□□□□ -1.64
RPRD1AQ96P16 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.83□□□□□ -1.64
RPRD1AQ96P16 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RPRD1AQ96P16 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RPRD1AQ96P16 OR10AB1P-202ENST00000641219 1686 ntBASIC4.83□□□□□ -1.64
RPRD1AQ96P16 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
RPRD1AQ96P16 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
RPRD1AQ96P16 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.83□□□□□ -1.64
RPRD1AQ96P16 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RPRD1AQ96P16 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.82□□□□□ -1.64
RPRD1AQ96P16 AL672167.1-204ENST00000641875 3017 ntBASIC4.82□□□□□ -1.64
RPRD1AQ96P16 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.82□□□□□ -1.64
RPRD1AQ96P16 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RPRD1AQ96P16 AC079741.1-201ENST00000321498 212 ntBASIC4.82□□□□□ -1.64
RPRD1AQ96P16 SNORA71.2-201ENST00000364941 134 ntBASIC4.82□□□□□ -1.64
RPRD1AQ96P16 MIR192-201ENST00000384915 110 ntBASIC4.82□□□□□ -1.64
RPRD1AQ96P16 MT-RNR1-201ENST00000389680 954 ntBASIC4.82□□□□□ -1.64
RPRD1AQ96P16 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms