Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AC107214.2-201ENST00000608204 634 ntBASIC5.9□□□□□ -1.46
PTCHD1Q96NR3 AC006924.1-201ENST00000610750 559 ntBASIC5.9□□□□□ -1.46
PTCHD1Q96NR3 TCL6_3.1-201ENST00000619064 137 ntBASIC5.9□□□□□ -1.46
PTCHD1Q96NR3 AL591926.1-201ENST00000620542 217 ntBASIC5.9□□□□□ -1.46
PTCHD1Q96NR3 AC018816.2-201ENST00000621460 353 ntBASIC5.9□□□□□ -1.46
PTCHD1Q96NR3 AC099654.14-201ENST00000638599 341 ntBASIC5.9□□□□□ -1.46
PTCHD1Q96NR3 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.9□□□□□ -1.47
PTCHD1Q96NR3 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
PTCHD1Q96NR3 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
PTCHD1Q96NR3 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC5.9□□□□□ -1.47
PTCHD1Q96NR3 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.9□□□□□ -1.47
PTCHD1Q96NR3 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.9□□□□□ -1.47
PTCHD1Q96NR3 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.9□□□□□ -1.47
PTCHD1Q96NR3 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 MAPK10-287ENST00000641217 3037 ntBASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 RNA5SP346-201ENST00000363541 121 ntBASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 RN7SKP226-201ENST00000364912 300 ntBASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 RN7SKP187-201ENST00000365536 330 ntBASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 SNORD115-47-201ENST00000391226 86 ntBASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 RN7SKP121-201ENST00000410842 305 ntBASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 AC009237.2-201ENST00000421358 284 ntBASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 GLRXP1-201ENST00000423261 334 ntBASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 RPS7P14-201ENST00000426405 583 ntBASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 AC104843.2-201ENST00000427666 297 ntBASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 AL512649.1-201ENST00000428997 581 ntBASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 UBE2V1P5-201ENST00000440070 405 ntBASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 TRIM60P16-201ENST00000444048 694 ntBASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 ANKRD30BP3-201ENST00000444850 1070 ntBASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 AC239367.2-201ENST00000447309 705 ntBASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 HMGB1P7-201ENST00000450921 612 ntBASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 RANP2-201ENST00000456833 229 ntBASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 KLF3P2-201ENST00000465138 268 ntBASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 HMGN2P25-201ENST00000486956 268 ntBASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 AC023424.2-201ENST00000493479 777 ntBASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 SNX5P1-201ENST00000505757 1041 ntBASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 RPL7L1P13-201ENST00000511702 739 ntBASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 MTCYBP43-201ENST00000513621 740 ntBASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 MAST4-IT1-201ENST00000514241 658 ntBASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 OR4R3P-201ENST00000525084 838 ntBASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 AC087276.1-201ENST00000529659 480 ntBASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 MIR4502-201ENST00000580432 81 ntBASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 MIR4433B-201ENST00000581329 102 ntBASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 AC010487.1-201ENST00000594408 1172 ntBASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 AC091965.4-201ENST00000607691 587 ntBASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 AC091304.9-201ENST00000612091 226 ntBASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 CR381653.2-201ENST00000624041 768 ntBASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 AP001052.1-201ENST00000626421 99 ntBASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 MKKS-204ENST00000639674 192 ntBASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 AC107982.1-201ENST00000507171 1300 ntBASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 AC073365.1-203ENST00000641055 1992 ntBASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 BRAFP1-201ENST00000445336 2703 ntBASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 BIN2P1-201ENST00000504996 1530 ntBASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 AC007159.1-201ENST00000566529 4706 ntBASIC5.89□□□□□ -1.47
PTCHD1Q96NR3 HSPD1P9-201ENST00000420325 1636 ntBASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 419.2 ms