Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.93□□□□□ -1.46
CDK5RAP3Q96JB5 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
CDK5RAP3Q96JB5 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
CDK5RAP3Q96JB5 AL355578.1-201ENST00000607405 1328 ntBASIC5.93□□□□□ -1.46
CDK5RAP3Q96JB5 OR55B1P-203ENST00000641518 2602 ntBASIC5.93□□□□□ -1.46
CDK5RAP3Q96JB5 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CDK5RAP3Q96JB5 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CDK5RAP3Q96JB5 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CDK5RAP3Q96JB5 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.92□□□□□ -1.46
CDK5RAP3Q96JB5 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
CDK5RAP3Q96JB5 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC5.92□□□□□ -1.46
CDK5RAP3Q96JB5 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.92□□□□□ -1.46
CDK5RAP3Q96JB5 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.92□□□□□ -1.46
CDK5RAP3Q96JB5 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.92□□□□□ -1.46
CDK5RAP3Q96JB5 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.92□□□□□ -1.46
CDK5RAP3Q96JB5 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CDK5RAP3Q96JB5 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CDK5RAP3Q96JB5 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.92□□□□□ -1.46
CDK5RAP3Q96JB5 RN7SKP74-201ENST00000362849 309 ntBASIC5.92□□□□□ -1.46
CDK5RAP3Q96JB5 RNA5SP223-201ENST00000365174 120 ntBASIC5.92□□□□□ -1.46
CDK5RAP3Q96JB5 SNORA5.1-201ENST00000384275 131 ntBASIC5.92□□□□□ -1.46
CDK5RAP3Q96JB5 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
CDK5RAP3Q96JB5 SNORD65C-201ENST00000390962 71 ntBASIC5.92□□□□□ -1.46
CDK5RAP3Q96JB5 MCTS2P-201ENST00000394552 546 ntBASIC5.92□□□□□ -1.46
CDK5RAP3Q96JB5 HMGB3P18-201ENST00000406327 590 ntBASIC5.92□□□□□ -1.46
CDK5RAP3Q96JB5 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC5.92□□□□□ -1.46
CDK5RAP3Q96JB5 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.92□□□□□ -1.46
CDK5RAP3Q96JB5 RN7SKP206-201ENST00000410823 293 ntBASIC5.92□□□□□ -1.46
CDK5RAP3Q96JB5 NPM1P4-201ENST00000414095 812 ntBASIC5.92□□□□□ -1.46
CDK5RAP3Q96JB5 OR6C64P-201ENST00000419708 825 ntBASIC5.92□□□□□ -1.46
CDK5RAP3Q96JB5 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC5.92□□□□□ -1.46
CDK5RAP3Q96JB5 HSPD1P12-201ENST00000429127 1069 ntBASIC5.92□□□□□ -1.46
CDK5RAP3Q96JB5 CFL1P1-202ENST00000432948 411 ntBASIC5.92□□□□□ -1.46
CDK5RAP3Q96JB5 CLUHP1-201ENST00000435012 1190 ntBASIC5.92□□□□□ -1.46
CDK5RAP3Q96JB5 AC099063.2-201ENST00000446360 662 ntBASIC5.92□□□□□ -1.46
CDK5RAP3Q96JB5 OR51B8P-201ENST00000449892 769 ntBASIC5.92□□□□□ -1.46
CDK5RAP3Q96JB5 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.92□□□□□ -1.46
CDK5RAP3Q96JB5 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.92□□□□□ -1.46
CDK5RAP3Q96JB5 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.92□□□□□ -1.46
CDK5RAP3Q96JB5 AC096992.1-201ENST00000459808 709 ntBASIC5.92□□□□□ -1.46
CDK5RAP3Q96JB5 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.92□□□□□ -1.46
CDK5RAP3Q96JB5 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.92□□□□□ -1.46
CDK5RAP3Q96JB5 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC5.92□□□□□ -1.46
CDK5RAP3Q96JB5 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.92□□□□□ -1.46
CDK5RAP3Q96JB5 OR8I1P-201ENST00000529291 931 ntBASIC5.92□□□□□ -1.46
CDK5RAP3Q96JB5 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.92□□□□□ -1.46
CDK5RAP3Q96JB5 AL049779.2-201ENST00000553847 315 ntBASIC5.92□□□□□ -1.46
CDK5RAP3Q96JB5 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.92□□□□□ -1.46
CDK5RAP3Q96JB5 RN7SL708P-201ENST00000580952 299 ntBASIC5.92□□□□□ -1.46
CDK5RAP3Q96JB5 SS18L2P2-201ENST00000583960 235 ntBASIC5.92□□□□□ -1.46
CDK5RAP3Q96JB5 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.92□□□□□ -1.46
CDK5RAP3Q96JB5 FKBP1AP1-201ENST00000594588 318 ntBASIC5.92□□□□□ -1.46
CDK5RAP3Q96JB5 AC124856.1-201ENST00000600819 896 ntBASIC5.92□□□□□ -1.46
CDK5RAP3Q96JB5 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC5.92□□□□□ -1.46
CDK5RAP3Q96JB5 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
CDK5RAP3Q96JB5 AL034549.2-201ENST00000618285 3373 ntBASIC5.92□□□□□ -1.46
CDK5RAP3Q96JB5 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
CDK5RAP3Q96JB5 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.92□□□□□ -1.46
CDK5RAP3Q96JB5 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
CDK5RAP3Q96JB5 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CDK5RAP3Q96JB5 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.92□□□□□ -1.46
CDK5RAP3Q96JB5 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
CDK5RAP3Q96JB5 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.92□□□□□ -1.46
CDK5RAP3Q96JB5 AP000542.2-201ENST00000623199 6179 ntBASIC5.92□□□□□ -1.46
CDK5RAP3Q96JB5 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.92□□□□□ -1.46
CDK5RAP3Q96JB5 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.92□□□□□ -1.46
CDK5RAP3Q96JB5 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.92□□□□□ -1.46
CDK5RAP3Q96JB5 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CDK5RAP3Q96JB5 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CDK5RAP3Q96JB5 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
CDK5RAP3Q96JB5 AC099786.3-201ENST00000565735 1410 ntBASIC5.91□□□□□ -1.46
CDK5RAP3Q96JB5 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CDK5RAP3Q96JB5 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CDK5RAP3Q96JB5 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CDK5RAP3Q96JB5 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.91□□□□□ -1.46
CDK5RAP3Q96JB5 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CDK5RAP3Q96JB5 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
CDK5RAP3Q96JB5 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CDK5RAP3Q96JB5 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
CDK5RAP3Q96JB5 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
CDK5RAP3Q96JB5 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.91□□□□□ -1.46
CDK5RAP3Q96JB5 MIR589-201ENST00000385238 99 ntBASIC5.91□□□□□ -1.46
CDK5RAP3Q96JB5 OR8V1P-201ENST00000395193 873 ntBASIC5.91□□□□□ -1.46
CDK5RAP3Q96JB5 DNAJC19P6-201ENST00000401853 280 ntBASIC5.91□□□□□ -1.46
CDK5RAP3Q96JB5 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.91□□□□□ -1.46
CDK5RAP3Q96JB5 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.91□□□□□ -1.46
CDK5RAP3Q96JB5 RPL35AP24-201ENST00000413846 330 ntBASIC5.91□□□□□ -1.46
CDK5RAP3Q96JB5 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.91□□□□□ -1.46
CDK5RAP3Q96JB5 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC5.91□□□□□ -1.46
CDK5RAP3Q96JB5 AC246680.2-201ENST00000422106 389 ntBASIC5.91□□□□□ -1.46
CDK5RAP3Q96JB5 DNAJA1P1-201ENST00000425106 1187 ntBASIC5.91□□□□□ -1.46
CDK5RAP3Q96JB5 GTF2IP3-201ENST00000433887 494 ntBASIC5.91□□□□□ -1.46
CDK5RAP3Q96JB5 MTCO1P52-201ENST00000433928 531 ntBASIC5.91□□□□□ -1.46
CDK5RAP3Q96JB5 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.91□□□□□ -1.46
CDK5RAP3Q96JB5 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.91□□□□□ -1.46
CDK5RAP3Q96JB5 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC5.91□□□□□ -1.46
CDK5RAP3Q96JB5 GAPDHP58-201ENST00000438477 1006 ntBASIC5.91□□□□□ -1.46
CDK5RAP3Q96JB5 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC5.91□□□□□ -1.46
CDK5RAP3Q96JB5 PPIAP20-201ENST00000449839 135 ntBASIC5.91□□□□□ -1.46
CDK5RAP3Q96JB5 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms