Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.88□□□□□ -1.47
HPS3Q969F9 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HPS3Q969F9 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
HPS3Q969F9 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HPS3Q969F9 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.88□□□□□ -1.47
HPS3Q969F9 IGKV7-3-201ENST00000357453 298 ntBASIC5.88□□□□□ -1.47
HPS3Q969F9 RNU6-249P-201ENST00000363016 102 ntBASIC5.88□□□□□ -1.47
HPS3Q969F9 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HPS3Q969F9 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HPS3Q969F9 OR1L6-202ENST00000373684 1044 ntBASIC5.88□□□□□ -1.47
HPS3Q969F9 RNU6-98P-201ENST00000384173 107 ntBASIC5.88□□□□□ -1.47
HPS3Q969F9 SNORA5.1-201ENST00000384275 131 ntBASIC5.88□□□□□ -1.47
HPS3Q969F9 RNA5SP339-201ENST00000390987 122 ntBASIC5.88□□□□□ -1.47
HPS3Q969F9 AL136310.1-201ENST00000404926 654 ntBASIC5.88□□□□□ -1.47
HPS3Q969F9 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.88□□□□□ -1.47
HPS3Q969F9 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC5.88□□□□□ -1.47
HPS3Q969F9 AC079809.1-201ENST00000415468 276 ntBASIC5.88□□□□□ -1.47
HPS3Q969F9 OR2X1P-201ENST00000421144 687 ntBASIC5.88□□□□□ -1.47
HPS3Q969F9 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.88□□□□□ -1.47
HPS3Q969F9 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HPS3Q969F9 AC068135.1-201ENST00000446164 246 ntBASIC5.88□□□□□ -1.47
HPS3Q969F9 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.88□□□□□ -1.47
HPS3Q969F9 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.88□□□□□ -1.47
HPS3Q969F9 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.88□□□□□ -1.47
HPS3Q969F9 RNU7-140P-201ENST00000459546 60 ntBASIC5.88□□□□□ -1.47
HPS3Q969F9 AC069528.1-202ENST00000482888 637 ntBASIC5.88□□□□□ -1.47
HPS3Q969F9 RPL7P41-201ENST00000485823 957 ntBASIC5.88□□□□□ -1.47
HPS3Q969F9 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC5.88□□□□□ -1.47
HPS3Q969F9 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.88□□□□□ -1.47
HPS3Q969F9 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.88□□□□□ -1.47
HPS3Q969F9 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.88□□□□□ -1.47
HPS3Q969F9 IGLV2-28-201ENST00000520681 304 ntBASIC5.88□□□□□ -1.47
HPS3Q969F9 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.88□□□□□ -1.47
HPS3Q969F9 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.88□□□□□ -1.47
HPS3Q969F9 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HPS3Q969F9 AC005341.1-201ENST00000571086 708 ntBASIC5.88□□□□□ -1.47
HPS3Q969F9 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC5.88□□□□□ -1.47
HPS3Q969F9 AC006363.1-201ENST00000603806 463 ntBASIC5.88□□□□□ -1.47
HPS3Q969F9 AC079395.2-201ENST00000610982 737 ntBASIC5.88□□□□□ -1.47
HPS3Q969F9 OR1S1-201ENST00000624470 978 ntBASIC5.88□□□□□ -1.47
HPS3Q969F9 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.88□□□□□ -1.47
HPS3Q969F9 CYP4F35P-202ENST00000636121 390 ntBASIC5.88□□□□□ -1.47
HPS3Q969F9 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
HPS3Q969F9 BX649567.1-201ENST00000642071 1134 ntBASIC5.88□□□□□ -1.47
HPS3Q969F9 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
HPS3Q969F9 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
HPS3Q969F9 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
HPS3Q969F9 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
HPS3Q969F9 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
HPS3Q969F9 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
HPS3Q969F9 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HPS3Q969F9 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HPS3Q969F9 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HPS3Q969F9 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
HPS3Q969F9 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HPS3Q969F9 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HPS3Q969F9 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HPS3Q969F9 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.87□□□□□ -1.47
HPS3Q969F9 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.87□□□□□ -1.47
HPS3Q969F9 OR9G4-201ENST00000302957 984 ntBASIC5.87□□□□□ -1.47
HPS3Q969F9 RNU6-353P-201ENST00000364266 108 ntBASIC5.87□□□□□ -1.47
HPS3Q969F9 RNA5SP132-201ENST00000364725 118 ntBASIC5.87□□□□□ -1.47
HPS3Q969F9 RNU4-28P-201ENST00000364739 141 ntBASIC5.87□□□□□ -1.47
HPS3Q969F9 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HPS3Q969F9 RNU6-636P-201ENST00000384598 107 ntBASIC5.87□□□□□ -1.47
HPS3Q969F9 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.87□□□□□ -1.47
HPS3Q969F9 RPL22P18-201ENST00000417197 377 ntBASIC5.87□□□□□ -1.47
HPS3Q969F9 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC5.87□□□□□ -1.47
HPS3Q969F9 AL513175.2-201ENST00000422071 443 ntBASIC5.87□□□□□ -1.47
HPS3Q969F9 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.87□□□□□ -1.47
HPS3Q969F9 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC5.87□□□□□ -1.47
HPS3Q969F9 AC124944.2-201ENST00000429866 1242 ntBASIC5.87□□□□□ -1.47
HPS3Q969F9 MTCYBP31-201ENST00000438855 1122 ntBASIC5.87□□□□□ -1.47
HPS3Q969F9 AL035551.1-201ENST00000446931 348 ntBASIC5.87□□□□□ -1.47
HPS3Q969F9 GAPDHP25-201ENST00000447061 1001 ntBASIC5.87□□□□□ -1.47
HPS3Q969F9 RPS6P2-201ENST00000454208 705 ntBASIC5.87□□□□□ -1.47
HPS3Q969F9 RPS4XP1-201ENST00000482189 787 ntBASIC5.87□□□□□ -1.47
HPS3Q969F9 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.87□□□□□ -1.47
HPS3Q969F9 BOLA3P3-201ENST00000505182 232 ntBASIC5.87□□□□□ -1.47
HPS3Q969F9 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.87□□□□□ -1.47
HPS3Q969F9 AC008638.1-201ENST00000506035 866 ntBASIC5.87□□□□□ -1.47
HPS3Q969F9 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC5.87□□□□□ -1.47
HPS3Q969F9 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC5.87□□□□□ -1.47
HPS3Q969F9 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.87□□□□□ -1.47
HPS3Q969F9 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
HPS3Q969F9 HMGB1P40-201ENST00000525121 540 ntBASIC5.87□□□□□ -1.47
HPS3Q969F9 AC124293.1-201ENST00000530034 493 ntBASIC5.87□□□□□ -1.47
HPS3Q969F9 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.87□□□□□ -1.47
HPS3Q969F9 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.87□□□□□ -1.47
HPS3Q969F9 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HPS3Q969F9 MIR4675-201ENST00000577898 77 ntBASIC5.87□□□□□ -1.47
HPS3Q969F9 MIR3176-201ENST00000582210 90 ntBASIC5.87□□□□□ -1.47
HPS3Q969F9 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.87□□□□□ -1.47
HPS3Q969F9 AC245036.5-201ENST00000596330 847 ntBASIC5.87□□□□□ -1.47
HPS3Q969F9 AL035411.2-201ENST00000604022 421 ntBASIC5.87□□□□□ -1.47
HPS3Q969F9 AL162431.4-201ENST00000604674 411 ntBASIC5.87□□□□□ -1.47
HPS3Q969F9 AC011626.1-201ENST00000604710 562 ntBASIC5.87□□□□□ -1.47
HPS3Q969F9 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC5.87□□□□□ -1.47
HPS3Q969F9 AL512624.1-201ENST00000613638 469 ntBASIC5.87□□□□□ -1.47
HPS3Q969F9 AC074140.1-201ENST00000621617 208 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms