Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
LYSMD3Q7Z3D4 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
LYSMD3Q7Z3D4 AL592429.1-201ENST00000403909 1473 ntBASIC6.96□□□□□ -1.3
LYSMD3Q7Z3D4 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
LYSMD3Q7Z3D4 CYP2G2P-201ENST00000594920 1485 ntBASIC6.96□□□□□ -1.3
LYSMD3Q7Z3D4 TMEM75-201ENST00000624314 2165 ntBASIC6.96□□□□□ -1.3
LYSMD3Q7Z3D4 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
LYSMD3Q7Z3D4 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
LYSMD3Q7Z3D4 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
LYSMD3Q7Z3D4 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
LYSMD3Q7Z3D4 AL359263.1-201ENST00000441188 2796 ntBASIC6.96□□□□□ -1.3
LYSMD3Q7Z3D4 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC6.96□□□□□ -1.3
LYSMD3Q7Z3D4 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC6.95□□□□□ -1.3
LYSMD3Q7Z3D4 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
LYSMD3Q7Z3D4 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
LYSMD3Q7Z3D4 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
LYSMD3Q7Z3D4 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
LYSMD3Q7Z3D4 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC6.95□□□□□ -1.3
LYSMD3Q7Z3D4 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
LYSMD3Q7Z3D4 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.95□□□□□ -1.3
LYSMD3Q7Z3D4 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
LYSMD3Q7Z3D4 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
LYSMD3Q7Z3D4 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
LYSMD3Q7Z3D4 RN7SKP47-201ENST00000365347 328 ntBASIC6.95□□□□□ -1.3
LYSMD3Q7Z3D4 MIR187-201ENST00000385062 109 ntBASIC6.95□□□□□ -1.3
LYSMD3Q7Z3D4 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
LYSMD3Q7Z3D4 AC068050.1-201ENST00000394891 380 ntBASIC6.95□□□□□ -1.3
LYSMD3Q7Z3D4 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
LYSMD3Q7Z3D4 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC6.95□□□□□ -1.3
LYSMD3Q7Z3D4 RN7SKP279-201ENST00000411383 298 ntBASIC6.95□□□□□ -1.3
LYSMD3Q7Z3D4 AL590806.1-201ENST00000415818 853 ntBASIC6.95□□□□□ -1.3
LYSMD3Q7Z3D4 AC114814.2-201ENST00000419195 485 ntBASIC6.95□□□□□ -1.3
LYSMD3Q7Z3D4 PUDPP2-201ENST00000431423 643 ntBASIC6.95□□□□□ -1.3
LYSMD3Q7Z3D4 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC6.95□□□□□ -1.3
LYSMD3Q7Z3D4 SNRPEP4-201ENST00000435815 279 ntBASIC6.95□□□□□ -1.3
LYSMD3Q7Z3D4 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC6.95□□□□□ -1.3
LYSMD3Q7Z3D4 RNU6-1208P-201ENST00000459588 107 ntBASIC6.95□□□□□ -1.3
LYSMD3Q7Z3D4 MRPS17P3-201ENST00000465453 385 ntBASIC6.95□□□□□ -1.3
LYSMD3Q7Z3D4 RN7SL259P-201ENST00000478499 253 ntBASIC6.95□□□□□ -1.3
LYSMD3Q7Z3D4 RN7SL379P-201ENST00000479912 293 ntBASIC6.95□□□□□ -1.3
LYSMD3Q7Z3D4 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC6.95□□□□□ -1.3
LYSMD3Q7Z3D4 RN7SL612P-201ENST00000497704 295 ntBASIC6.95□□□□□ -1.3
LYSMD3Q7Z3D4 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC6.95□□□□□ -1.3
LYSMD3Q7Z3D4 AC005741.1-201ENST00000511094 432 ntBASIC6.95□□□□□ -1.3
LYSMD3Q7Z3D4 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC6.95□□□□□ -1.3
LYSMD3Q7Z3D4 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC6.95□□□□□ -1.3
LYSMD3Q7Z3D4 RNA5SP401-201ENST00000515920 127 ntBASIC6.95□□□□□ -1.3
LYSMD3Q7Z3D4 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC6.95□□□□□ -1.3
LYSMD3Q7Z3D4 CASC11-203ENST00000519071 791 ntTSL 3 BASIC6.95□□□□□ -1.3
LYSMD3Q7Z3D4 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC6.95□□□□□ -1.3
LYSMD3Q7Z3D4 COX6B1P4-201ENST00000519826 484 ntBASIC6.95□□□□□ -1.3
LYSMD3Q7Z3D4 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC6.95□□□□□ -1.3
LYSMD3Q7Z3D4 AC026458.1-201ENST00000564330 438 ntBASIC6.95□□□□□ -1.3
LYSMD3Q7Z3D4 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC6.95□□□□□ -1.3
LYSMD3Q7Z3D4 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.95□□□□□ -1.3
LYSMD3Q7Z3D4 MIR4742-201ENST00000581069 85 ntBASIC6.95□□□□□ -1.3
LYSMD3Q7Z3D4 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC6.95□□□□□ -1.3
LYSMD3Q7Z3D4 CTHRC1P1-201ENST00000605383 469 ntBASIC6.95□□□□□ -1.3
LYSMD3Q7Z3D4 5S_rRNA.23-201ENST00000612086 102 ntBASIC6.95□□□□□ -1.3
LYSMD3Q7Z3D4 AC093913.1-201ENST00000614178 329 ntBASIC6.95□□□□□ -1.3
LYSMD3Q7Z3D4 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
LYSMD3Q7Z3D4 AC090617.10-201ENST00000624308 134 ntBASIC6.95□□□□□ -1.3
LYSMD3Q7Z3D4 AC231657.1-201ENST00000624313 397 ntBASIC6.95□□□□□ -1.3
LYSMD3Q7Z3D4 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.95□□□□□ -1.3
LYSMD3Q7Z3D4 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
LYSMD3Q7Z3D4 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
LYSMD3Q7Z3D4 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC6.95□□□□□ -1.3
LYSMD3Q7Z3D4 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC6.95□□□□□ -1.3
LYSMD3Q7Z3D4 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC6.95□□□□□ -1.3
LYSMD3Q7Z3D4 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
LYSMD3Q7Z3D4 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC6.95□□□□□ -1.3
LYSMD3Q7Z3D4 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
LYSMD3Q7Z3D4 MTND4P35-201ENST00000604257 1375 ntBASIC6.95□□□□□ -1.3
LYSMD3Q7Z3D4 AP004289.1-201ENST00000436307 2205 ntBASIC6.95□□□□□ -1.3
LYSMD3Q7Z3D4 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
LYSMD3Q7Z3D4 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC6.94□□□□□ -1.3
LYSMD3Q7Z3D4 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC6.94□□□□□ -1.3
LYSMD3Q7Z3D4 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
LYSMD3Q7Z3D4 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
LYSMD3Q7Z3D4 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC6.94□□□□□ -1.3
LYSMD3Q7Z3D4 GTF2H2B-203ENST00000508065 1432 ntBASIC6.94□□□□□ -1.3
LYSMD3Q7Z3D4 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
LYSMD3Q7Z3D4 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
LYSMD3Q7Z3D4 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC6.94□□□□□ -1.3
LYSMD3Q7Z3D4 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
LYSMD3Q7Z3D4 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC6.94□□□□□ -1.3
LYSMD3Q7Z3D4 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
LYSMD3Q7Z3D4 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
LYSMD3Q7Z3D4 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
LYSMD3Q7Z3D4 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC6.94□□□□□ -1.3
LYSMD3Q7Z3D4 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
LYSMD3Q7Z3D4 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
LYSMD3Q7Z3D4 RNU6-492P-201ENST00000363035 104 ntBASIC6.94□□□□□ -1.3
LYSMD3Q7Z3D4 Y_RNA.193-201ENST00000363979 102 ntBASIC6.94□□□□□ -1.3
LYSMD3Q7Z3D4 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC6.94□□□□□ -1.3
LYSMD3Q7Z3D4 MIR99A-201ENST00000384906 81 ntBASIC6.94□□□□□ -1.3
LYSMD3Q7Z3D4 SNORD115.1-201ENST00000391109 76 ntBASIC6.94□□□□□ -1.3
LYSMD3Q7Z3D4 RPS4XP8-201ENST00000402039 771 ntBASIC6.94□□□□□ -1.3
LYSMD3Q7Z3D4 AL390316.1-201ENST00000406279 553 ntBASIC6.94□□□□□ -1.3
LYSMD3Q7Z3D4 AL139805.1-201ENST00000407837 289 ntBASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms