Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
RTL4Q6ZR62 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
RTL4Q6ZR62 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RTL4Q6ZR62 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
RTL4Q6ZR62 AL592291.1-201ENST00000403830 352 ntBASIC4.42□□□□□ -1.7
RTL4Q6ZR62 U3.35-201ENST00000408405 208 ntBASIC4.42□□□□□ -1.7
RTL4Q6ZR62 RNA5SP146-201ENST00000410743 123 ntBASIC4.42□□□□□ -1.7
RTL4Q6ZR62 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.42□□□□□ -1.7
RTL4Q6ZR62 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.42□□□□□ -1.7
RTL4Q6ZR62 AL590139.1-201ENST00000416267 400 ntBASIC4.42□□□□□ -1.7
RTL4Q6ZR62 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.42□□□□□ -1.7
RTL4Q6ZR62 LINC00993-201ENST00000420453 540 ntBASIC4.42□□□□□ -1.7
RTL4Q6ZR62 RGS17P1-201ENST00000423358 553 ntBASIC4.42□□□□□ -1.7
RTL4Q6ZR62 GTF2IP2-201ENST00000424290 697 ntBASIC4.42□□□□□ -1.7
RTL4Q6ZR62 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.42□□□□□ -1.7
RTL4Q6ZR62 OR2B7P-201ENST00000429302 934 ntBASIC4.42□□□□□ -1.7
RTL4Q6ZR62 RPS17P8-201ENST00000434525 335 ntBASIC4.42□□□□□ -1.7
RTL4Q6ZR62 AL451139.1-201ENST00000434718 346 ntBASIC4.42□□□□□ -1.7
RTL4Q6ZR62 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.42□□□□□ -1.7
RTL4Q6ZR62 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.42□□□□□ -1.7
RTL4Q6ZR62 AC022431.1-201ENST00000450941 438 ntBASIC4.42□□□□□ -1.7
RTL4Q6ZR62 RN7SL558P-201ENST00000497468 299 ntBASIC4.42□□□□□ -1.7
RTL4Q6ZR62 RNU6-709P-201ENST00000517257 104 ntBASIC4.42□□□□□ -1.7
RTL4Q6ZR62 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.42□□□□□ -1.7
RTL4Q6ZR62 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.42□□□□□ -1.7
RTL4Q6ZR62 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.42□□□□□ -1.7
RTL4Q6ZR62 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.42□□□□□ -1.7
RTL4Q6ZR62 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.42□□□□□ -1.7
RTL4Q6ZR62 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.42□□□□□ -1.7
RTL4Q6ZR62 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.42□□□□□ -1.7
RTL4Q6ZR62 AC244517.3-201ENST00000616254 1235 ntBASIC4.42□□□□□ -1.7
RTL4Q6ZR62 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
RTL4Q6ZR62 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.42□□□□□ -1.7
RTL4Q6ZR62 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC4.42□□□□□ -1.7
RTL4Q6ZR62 AC007382.1-201ENST00000624376 2618 ntBASIC4.42□□□□□ -1.7
RTL4Q6ZR62 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
RTL4Q6ZR62 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RTL4Q6ZR62 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.41□□□□□ -1.7
RTL4Q6ZR62 RN7SKP115-201ENST00000363177 317 ntBASIC4.41□□□□□ -1.7
RTL4Q6ZR62 RNA5SP28-201ENST00000363841 119 ntBASIC4.41□□□□□ -1.7
RTL4Q6ZR62 RNVU1-6-201ENST00000364688 164 ntBASIC4.41□□□□□ -1.7
RTL4Q6ZR62 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC4.41□□□□□ -1.7
RTL4Q6ZR62 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RTL4Q6ZR62 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
RTL4Q6ZR62 CYB5AP4-201ENST00000396692 399 ntBASIC4.41□□□□□ -1.7
RTL4Q6ZR62 ATG4AP1-201ENST00000416893 538 ntBASIC4.41□□□□□ -1.7
RTL4Q6ZR62 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.41□□□□□ -1.7
RTL4Q6ZR62 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.41□□□□□ -1.7
RTL4Q6ZR62 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.41□□□□□ -1.7
RTL4Q6ZR62 AC005154.2-201ENST00000438110 379 ntBASIC4.41□□□□□ -1.7
RTL4Q6ZR62 AC016831.4-201ENST00000438302 307 ntBASIC4.41□□□□□ -1.7
RTL4Q6ZR62 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.41□□□□□ -1.7
RTL4Q6ZR62 IGLV2-34-201ENST00000490007 283 ntBASIC4.41□□□□□ -1.7
RTL4Q6ZR62 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.41□□□□□ -1.7
RTL4Q6ZR62 SCARNA22-201ENST00000503991 125 ntBASIC4.41□□□□□ -1.7
RTL4Q6ZR62 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.41□□□□□ -1.7
RTL4Q6ZR62 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.41□□□□□ -1.7
RTL4Q6ZR62 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC4.41□□□□□ -1.7
RTL4Q6ZR62 MTND2P17-201ENST00000550281 688 ntBASIC4.41□□□□□ -1.7
RTL4Q6ZR62 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.41□□□□□ -1.7
RTL4Q6ZR62 AC087477.6-201ENST00000559595 843 ntBASIC4.41□□□□□ -1.7
RTL4Q6ZR62 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.41□□□□□ -1.7
RTL4Q6ZR62 RN7SL802P-201ENST00000577858 299 ntBASIC4.41□□□□□ -1.7
RTL4Q6ZR62 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC4.41□□□□□ -1.7
RTL4Q6ZR62 AL159169.2-201ENST00000610061 1269 ntBASIC4.41□□□□□ -1.7
RTL4Q6ZR62 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RTL4Q6ZR62 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.41□□□□□ -1.7
RTL4Q6ZR62 MIR6853-201ENST00000619642 74 ntBASIC4.41□□□□□ -1.7
RTL4Q6ZR62 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RTL4Q6ZR62 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RTL4Q6ZR62 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.41□□□□□ -1.7
RTL4Q6ZR62 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.41□□□□□ -1.7
RTL4Q6ZR62 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC4.41□□□□□ -1.7
RTL4Q6ZR62 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RTL4Q6ZR62 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
RTL4Q6ZR62 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RTL4Q6ZR62 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.41□□□□□ -1.7
RTL4Q6ZR62 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.41□□□□□ -1.7
RTL4Q6ZR62 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.4□□□□□ -1.7
RTL4Q6ZR62 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RTL4Q6ZR62 MAPK10-303ENST00000641324 3959 ntBASIC4.4□□□□□ -1.7
RTL4Q6ZR62 AC092435.4-201ENST00000623012 4159 ntBASIC4.4□□□□□ -1.7
RTL4Q6ZR62 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.7
RTL4Q6ZR62 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RTL4Q6ZR62 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.7
RTL4Q6ZR62 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.4□□□□□ -1.7
RTL4Q6ZR62 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RTL4Q6ZR62 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RTL4Q6ZR62 MIR192-201ENST00000384915 110 ntBASIC4.4□□□□□ -1.71
RTL4Q6ZR62 RPS4XP9-201ENST00000405151 780 ntBASIC4.4□□□□□ -1.71
RTL4Q6ZR62 RPS16P5-201ENST00000406501 404 ntBASIC4.4□□□□□ -1.71
RTL4Q6ZR62 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC4.4□□□□□ -1.71
RTL4Q6ZR62 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.4□□□□□ -1.71
RTL4Q6ZR62 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC4.4□□□□□ -1.71
RTL4Q6ZR62 ARL4AP3-201ENST00000441452 574 ntBASIC4.4□□□□□ -1.71
RTL4Q6ZR62 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.4□□□□□ -1.71
RTL4Q6ZR62 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.4□□□□□ -1.71
RTL4Q6ZR62 AC099063.2-201ENST00000446360 662 ntBASIC4.4□□□□□ -1.71
RTL4Q6ZR62 AC073264.2-201ENST00000448886 166 ntBASIC4.4□□□□□ -1.71
RTL4Q6ZR62 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms