Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC6.57□□□□□ -1.36
SOX4Q06945 RN7SL193P-201ENST00000491708 276 ntBASIC6.57□□□□□ -1.36
SOX4Q06945 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.57□□□□□ -1.36
SOX4Q06945 NDUFA5P12-201ENST00000503796 343 ntBASIC6.57□□□□□ -1.36
SOX4Q06945 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC6.57□□□□□ -1.36
SOX4Q06945 AC106872.4-201ENST00000510050 523 ntBASIC6.57□□□□□ -1.36
SOX4Q06945 PTGES3P3-201ENST00000511479 482 ntBASIC6.57□□□□□ -1.36
SOX4Q06945 CYP4F27P-201ENST00000514557 494 ntBASIC6.57□□□□□ -1.36
SOX4Q06945 MTCO1P35-201ENST00000515270 228 ntBASIC6.57□□□□□ -1.36
SOX4Q06945 RNU6-1308P-201ENST00000516817 103 ntBASIC6.57□□□□□ -1.36
SOX4Q06945 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.57□□□□□ -1.36
SOX4Q06945 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC6.57□□□□□ -1.36
SOX4Q06945 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC6.57□□□□□ -1.36
SOX4Q06945 AC067852.5-201ENST00000589299 310 ntBASIC6.57□□□□□ -1.36
SOX4Q06945 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.57□□□□□ -1.36
SOX4Q06945 AC055876.5-201ENST00000605667 259 ntBASIC6.57□□□□□ -1.36
SOX4Q06945 AL121890.2-201ENST00000617644 465 ntBASIC6.57□□□□□ -1.36
SOX4Q06945 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC6.57□□□□□ -1.36
SOX4Q06945 FRG1KP-201ENST00000623592 341 ntBASIC6.57□□□□□ -1.36
SOX4Q06945 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC6.57□□□□□ -1.36
SOX4Q06945 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC6.57□□□□□ -1.36
SOX4Q06945 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
SOX4Q06945 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SOX4Q06945 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SOX4Q06945 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
SOX4Q06945 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
SOX4Q06945 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.57□□□□□ -1.36
SOX4Q06945 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC6.57□□□□□ -1.36
SOX4Q06945 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SOX4Q06945 AF287957.1-201ENST00000607368 1595 ntBASIC6.57□□□□□ -1.36
SOX4Q06945 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
SOX4Q06945 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.56□□□□□ -1.36
SOX4Q06945 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.56□□□□□ -1.36
SOX4Q06945 CASC19-243ENST00000641588 1546 ntBASIC6.56□□□□□ -1.36
SOX4Q06945 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
SOX4Q06945 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SOX4Q06945 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.56□□□□□ -1.36
SOX4Q06945 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
SOX4Q06945 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
SOX4Q06945 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC6.56□□□□□ -1.36
SOX4Q06945 RPL17P12-201ENST00000413391 526 ntBASIC6.56□□□□□ -1.36
SOX4Q06945 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.56□□□□□ -1.36
SOX4Q06945 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.56□□□□□ -1.36
SOX4Q06945 RPS7P8-201ENST00000418311 581 ntBASIC6.56□□□□□ -1.36
SOX4Q06945 AL121878.1-201ENST00000418638 859 ntBASIC6.56□□□□□ -1.36
SOX4Q06945 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.56□□□□□ -1.36
SOX4Q06945 AC007742.1-201ENST00000425789 329 ntBASIC6.56□□□□□ -1.36
SOX4Q06945 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SOX4Q06945 RPL31P54-201ENST00000429803 370 ntBASIC6.56□□□□□ -1.36
SOX4Q06945 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC6.56□□□□□ -1.36
SOX4Q06945 ELOCP26-201ENST00000436067 329 ntBASIC6.56□□□□□ -1.36
SOX4Q06945 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.56□□□□□ -1.36
SOX4Q06945 AL022237.1-201ENST00000446663 358 ntBASIC6.56□□□□□ -1.36
SOX4Q06945 MTND1P18-201ENST00000448191 573 ntBASIC6.56□□□□□ -1.36
SOX4Q06945 AC005077.1-201ENST00000449226 375 ntBASIC6.56□□□□□ -1.36
SOX4Q06945 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC6.56□□□□□ -1.36
SOX4Q06945 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC6.56□□□□□ -1.36
SOX4Q06945 CALM1P2-201ENST00000452941 448 ntBASIC6.56□□□□□ -1.36
SOX4Q06945 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC6.56□□□□□ -1.36
SOX4Q06945 DYNLL1P6-201ENST00000503440 264 ntBASIC6.56□□□□□ -1.36
SOX4Q06945 AC114781.3-201ENST00000512083 142 ntBASIC6.56□□□□□ -1.36
SOX4Q06945 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
SOX4Q06945 AC008802.1-201ENST00000519121 791 ntBASIC6.56□□□□□ -1.36
SOX4Q06945 AC083923.1-201ENST00000523708 376 ntBASIC6.56□□□□□ -1.36
SOX4Q06945 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC6.56□□□□□ -1.36
SOX4Q06945 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.56□□□□□ -1.36
SOX4Q06945 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC6.56□□□□□ -1.36
SOX4Q06945 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC6.56□□□□□ -1.36
SOX4Q06945 DUXAP4-201ENST00000603046 613 ntBASIC6.56□□□□□ -1.36
SOX4Q06945 AC008536.2-201ENST00000607284 349 ntBASIC6.56□□□□□ -1.36
SOX4Q06945 AC096861.1-201ENST00000616652 240 ntBASIC6.56□□□□□ -1.36
SOX4Q06945 AC245014.3-201ENST00000618589 347 ntBASIC6.56□□□□□ -1.36
SOX4Q06945 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.56□□□□□ -1.36
SOX4Q06945 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.56□□□□□ -1.36
SOX4Q06945 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SOX4Q06945 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
SOX4Q06945 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SOX4Q06945 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
SOX4Q06945 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.56□□□□□ -1.36
SOX4Q06945 AC139426.3-201ENST00000605648 2059 ntBASIC6.56□□□□□ -1.36
SOX4Q06945 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC6.56□□□□□ -1.36
SOX4Q06945 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
SOX4Q06945 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SOX4Q06945 CYP4Z2P-201ENST00000423332 1512 ntBASIC6.55□□□□□ -1.36
SOX4Q06945 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
SOX4Q06945 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SOX4Q06945 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
SOX4Q06945 DCAF13P3-201ENST00000561147 1334 ntBASIC6.55□□□□□ -1.36
SOX4Q06945 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SOX4Q06945 AOX3P-204ENST00000491025 2107 ntBASIC6.55□□□□□ -1.36
SOX4Q06945 AC092692.1-201ENST00000623625 2595 ntBASIC6.55□□□□□ -1.36
SOX4Q06945 AL117339.4-201ENST00000608335 7063 ntBASIC6.55□□□□□ -1.36
SOX4Q06945 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SOX4Q06945 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
SOX4Q06945 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC6.55□□□□□ -1.36
SOX4Q06945 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC6.55□□□□□ -1.36
SOX4Q06945 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
SOX4Q06945 RNU6-297P-201ENST00000384636 107 ntBASIC6.55□□□□□ -1.36
SOX4Q06945 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
SOX4Q06945 RPS20P15-201ENST00000412792 311 ntBASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms