Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TPM4P67936 AC012020.1-201ENST00000624541 1728 ntBASIC5.03□□□□□ -1.6
TPM4P67936 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.03□□□□□ -1.6
TPM4P67936 HSPA8P17-201ENST00000427029 1382 ntBASIC5.03□□□□□ -1.6
TPM4P67936 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.02□□□□□ -1.61
TPM4P67936 MFSD8-242ENST00000641690 4199 ntBASIC5.02□□□□□ -1.61
TPM4P67936 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
TPM4P67936 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TPM4P67936 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.02□□□□□ -1.61
TPM4P67936 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.02□□□□□ -1.61
TPM4P67936 AC010300.1-201ENST00000600671 5134 ntBASIC5.02□□□□□ -1.61
TPM4P67936 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.02□□□□□ -1.61
TPM4P67936 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
TPM4P67936 RNU6-1263P-201ENST00000384601 106 ntBASIC5.02□□□□□ -1.61
TPM4P67936 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
TPM4P67936 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.02□□□□□ -1.61
TPM4P67936 AC093162.1-201ENST00000419682 124 ntBASIC5.02□□□□□ -1.61
TPM4P67936 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TPM4P67936 HLA-N-201ENST00000437516 135 ntBASIC5.02□□□□□ -1.61
TPM4P67936 HMGB3P9-201ENST00000441799 583 ntBASIC5.02□□□□□ -1.61
TPM4P67936 MTND4LP12-201ENST00000448237 295 ntBASIC5.02□□□□□ -1.61
TPM4P67936 AC133473.1-201ENST00000455173 299 ntBASIC5.02□□□□□ -1.61
TPM4P67936 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
TPM4P67936 AC104109.1-201ENST00000498563 436 ntBASIC5.02□□□□□ -1.61
TPM4P67936 SCARNA22-201ENST00000503991 125 ntBASIC5.02□□□□□ -1.61
TPM4P67936 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TPM4P67936 ATP5LP3-201ENST00000514223 304 ntBASIC5.02□□□□□ -1.61
TPM4P67936 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.02□□□□□ -1.61
TPM4P67936 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.02□□□□□ -1.61
TPM4P67936 SMCR2_2.1-201ENST00000619783 161 ntBASIC5.02□□□□□ -1.61
TPM4P67936 U3.53-201ENST00000628922 216 ntBASIC5.02□□□□□ -1.61
TPM4P67936 AC107027.3-201ENST00000565095 3473 ntBASIC5.02□□□□□ -1.61
TPM4P67936 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.02□□□□□ -1.61
TPM4P67936 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
TPM4P67936 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TPM4P67936 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TPM4P67936 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TPM4P67936 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.01□□□□□ -1.61
TPM4P67936 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TPM4P67936 AC105074.1-201ENST00000623380 3095 ntBASIC5.01□□□□□ -1.61
TPM4P67936 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TPM4P67936 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TPM4P67936 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC5.01□□□□□ -1.61
TPM4P67936 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TPM4P67936 AL589994.1-201ENST00000404962 340 ntBASIC5.01□□□□□ -1.61
TPM4P67936 RAD23BP1-201ENST00000421404 1227 ntBASIC5.01□□□□□ -1.61
TPM4P67936 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.01□□□□□ -1.61
TPM4P67936 PRELID3BP10-201ENST00000431957 584 ntBASIC5.01□□□□□ -1.61
TPM4P67936 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.01□□□□□ -1.61
TPM4P67936 PTMAP3-201ENST00000447474 330 ntBASIC5.01□□□□□ -1.61
TPM4P67936 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC5.01□□□□□ -1.61
TPM4P67936 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.01□□□□□ -1.61
TPM4P67936 RN7SL174P-201ENST00000475578 289 ntBASIC5.01□□□□□ -1.61
TPM4P67936 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.01□□□□□ -1.61
TPM4P67936 PARP4P3-201ENST00000510265 317 ntBASIC5.01□□□□□ -1.61
TPM4P67936 AF186190.1-201ENST00000517470 480 ntBASIC5.01□□□□□ -1.61
TPM4P67936 AC090281.1-201ENST00000523019 276 ntBASIC5.01□□□□□ -1.61
TPM4P67936 OR5M7P-201ENST00000526140 972 ntBASIC5.01□□□□□ -1.61
TPM4P67936 GCSHP4-201ENST00000538792 439 ntBASIC5.01□□□□□ -1.61
TPM4P67936 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.01□□□□□ -1.61
TPM4P67936 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC5.01□□□□□ -1.61
TPM4P67936 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.01□□□□□ -1.61
TPM4P67936 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC5.01□□□□□ -1.61
TPM4P67936 AC068790.5-201ENST00000602741 355 ntBASIC5.01□□□□□ -1.61
TPM4P67936 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TPM4P67936 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TPM4P67936 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC5.01□□□□□ -1.61
TPM4P67936 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
TPM4P67936 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
TPM4P67936 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TPM4P67936 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC5□□□□□ -1.61
TPM4P67936 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
TPM4P67936 ZNF137P-201ENST00000456718 1920 ntBASIC5□□□□□ -1.61
TPM4P67936 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
TPM4P67936 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5□□□□□ -1.61
TPM4P67936 RNA5SP513-201ENST00000364648 118 ntBASIC5□□□□□ -1.61
TPM4P67936 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5□□□□□ -1.61
TPM4P67936 MIR513A2-201ENST00000385249 127 ntBASIC5□□□□□ -1.61
TPM4P67936 SDHCP2-201ENST00000398565 501 ntBASIC5□□□□□ -1.61
TPM4P67936 RPL31-204ENST00000409038 817 ntTSL 2 BASIC5□□□□□ -1.61
TPM4P67936 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
TPM4P67936 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5□□□□□ -1.61
TPM4P67936 SNORA74C-2-201ENST00000411179 201 ntBASIC5□□□□□ -1.61
TPM4P67936 AC108463.1-201ENST00000450258 347 ntBASIC5□□□□□ -1.61
TPM4P67936 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5□□□□□ -1.61
TPM4P67936 AL356390.1-201ENST00000455684 397 ntBASIC5□□□□□ -1.61
TPM4P67936 snoU13.20-201ENST00000459180 104 ntBASIC5□□□□□ -1.61
TPM4P67936 SCARNA10-201ENST00000459255 330 ntBASIC5□□□□□ -1.61
TPM4P67936 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5□□□□□ -1.61
TPM4P67936 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5□□□□□ -1.61
TPM4P67936 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5□□□□□ -1.61
TPM4P67936 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5□□□□□ -1.61
TPM4P67936 RNA5SP497-201ENST00000516081 97 ntBASIC5□□□□□ -1.61
TPM4P67936 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5□□□□□ -1.61
TPM4P67936 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5□□□□□ -1.61
TPM4P67936 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5□□□□□ -1.61
TPM4P67936 AC105036.1-201ENST00000566222 271 ntBASIC5□□□□□ -1.61
TPM4P67936 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC5□□□□□ -1.61
TPM4P67936 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5□□□□□ -1.61
TPM4P67936 AC011487.3-201ENST00000593607 453 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms