Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AC135352.1-201ENST00000506173 1418 ntBASIC4.38□□□□□ -1.71
LIM2P55344 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
LIM2P55344 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LIM2P55344 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LIM2P55344 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.38□□□□□ -1.71
LIM2P55344 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.38□□□□□ -1.71
LIM2P55344 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
LIM2P55344 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LIM2P55344 RN7SKP115-201ENST00000363177 317 ntBASIC4.38□□□□□ -1.71
LIM2P55344 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
LIM2P55344 AMZ2P2-201ENST00000406819 1057 ntBASIC4.38□□□□□ -1.71
LIM2P55344 AL359265.2-201ENST00000434367 631 ntBASIC4.38□□□□□ -1.71
LIM2P55344 VN1R48P-201ENST00000448149 1036 ntBASIC4.38□□□□□ -1.71
LIM2P55344 SBDSP1-204ENST00000453858 737 ntBASIC4.38□□□□□ -1.71
LIM2P55344 AC010326.1-201ENST00000462726 602 ntBASIC4.38□□□□□ -1.71
LIM2P55344 AC104763.1-201ENST00000475274 360 ntBASIC4.38□□□□□ -1.71
LIM2P55344 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.38□□□□□ -1.71
LIM2P55344 AC125612.1-201ENST00000547580 377 ntBASIC4.38□□□□□ -1.71
LIM2P55344 AC074029.2-201ENST00000551045 634 ntBASIC4.38□□□□□ -1.71
LIM2P55344 RN7SL690P-201ENST00000582087 240 ntBASIC4.38□□□□□ -1.71
LIM2P55344 FAM106CP-201ENST00000582212 507 ntBASIC4.38□□□□□ -1.71
LIM2P55344 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.38□□□□□ -1.71
LIM2P55344 AC004948.1-201ENST00000609858 672 ntBASIC4.38□□□□□ -1.71
LIM2P55344 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC4.38□□□□□ -1.71
LIM2P55344 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.38□□□□□ -1.71
LIM2P55344 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.38□□□□□ -1.71
LIM2P55344 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.38□□□□□ -1.71
LIM2P55344 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.38□□□□□ -1.71
LIM2P55344 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.38□□□□□ -1.71
LIM2P55344 ZNF137P-201ENST00000456718 1920 ntBASIC4.38□□□□□ -1.71
LIM2P55344 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LIM2P55344 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.38□□□□□ -1.71
LIM2P55344 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.38□□□□□ -1.71
LIM2P55344 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LIM2P55344 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
LIM2P55344 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
LIM2P55344 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.38□□□□□ -1.71
LIM2P55344 AL355852.1-201ENST00000454081 1771 ntBASIC4.37□□□□□ -1.71
LIM2P55344 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LIM2P55344 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LIM2P55344 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
LIM2P55344 AC110792.3-201ENST00000595906 1614 ntBASIC4.37□□□□□ -1.71
LIM2P55344 AL391684.1-202ENST00000641293 1636 ntBASIC4.37□□□□□ -1.71
LIM2P55344 OR56B2P-201ENST00000317102 954 ntBASIC4.37□□□□□ -1.71
LIM2P55344 RNVU1-6-201ENST00000364688 164 ntBASIC4.37□□□□□ -1.71
LIM2P55344 SNORA71.2-201ENST00000364941 134 ntBASIC4.37□□□□□ -1.71
LIM2P55344 MIR195-201ENST00000385194 87 ntBASIC4.37□□□□□ -1.71
LIM2P55344 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
LIM2P55344 RNU2-50P-201ENST00000410494 143 ntBASIC4.37□□□□□ -1.71
LIM2P55344 Z74021.1-201ENST00000423610 407 ntBASIC4.37□□□□□ -1.71
LIM2P55344 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.37□□□□□ -1.71
LIM2P55344 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.37□□□□□ -1.71
LIM2P55344 MORF4L1P4-201ENST00000450245 976 ntBASIC4.37□□□□□ -1.71
LIM2P55344 SCARNA10-201ENST00000459255 330 ntBASIC4.37□□□□□ -1.71
LIM2P55344 EIF2S2P4-201ENST00000461070 984 ntBASIC4.37□□□□□ -1.71
LIM2P55344 AC104629.2-201ENST00000468627 598 ntBASIC4.37□□□□□ -1.71
LIM2P55344 MTND4LP2-201ENST00000502312 285 ntBASIC4.37□□□□□ -1.71
LIM2P55344 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.37□□□□□ -1.71
LIM2P55344 AC007016.1-201ENST00000512110 244 ntBASIC4.37□□□□□ -1.71
LIM2P55344 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC4.37□□□□□ -1.71
LIM2P55344 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.37□□□□□ -1.71
LIM2P55344 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.37□□□□□ -1.71
LIM2P55344 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.37□□□□□ -1.71
LIM2P55344 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.37□□□□□ -1.71
LIM2P55344 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC4.37□□□□□ -1.71
LIM2P55344 AC008536.1-201ENST00000602872 669 ntBASIC4.37□□□□□ -1.71
LIM2P55344 AP004372.1-201ENST00000604842 844 ntBASIC4.37□□□□□ -1.71
LIM2P55344 AC116651.1-201ENST00000609724 556 ntBASIC4.37□□□□□ -1.71
LIM2P55344 MIR6780A-201ENST00000615089 68 ntBASIC4.37□□□□□ -1.71
LIM2P55344 AC074140.1-201ENST00000621617 208 ntBASIC4.37□□□□□ -1.71
LIM2P55344 AC004232.3-201ENST00000622977 525 ntBASIC4.37□□□□□ -1.71
LIM2P55344 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.37□□□□□ -1.71
LIM2P55344 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.37□□□□□ -1.71
LIM2P55344 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.37□□□□□ -1.71
LIM2P55344 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LIM2P55344 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LIM2P55344 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LIM2P55344 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LIM2P55344 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
LIM2P55344 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.37□□□□□ -1.71
LIM2P55344 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
LIM2P55344 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LIM2P55344 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LIM2P55344 AC007342.7-201ENST00000624610 2337 ntBASIC4.37□□□□□ -1.71
LIM2P55344 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
LIM2P55344 KARSP3-201ENST00000571212 1504 ntBASIC4.36□□□□□ -1.71
LIM2P55344 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
LIM2P55344 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
LIM2P55344 AC108467.2-201ENST00000617640 1597 ntBASIC4.36□□□□□ -1.71
LIM2P55344 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.36□□□□□ -1.71
LIM2P55344 AP001273.1-201ENST00000624493 3152 ntBASIC4.36□□□□□ -1.71
LIM2P55344 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.36□□□□□ -1.71
LIM2P55344 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LIM2P55344 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LIM2P55344 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
LIM2P55344 RNU4-7P-201ENST00000364758 141 ntBASIC4.36□□□□□ -1.71
LIM2P55344 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LIM2P55344 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.36□□□□□ -1.71
LIM2P55344 AL049697.2-201ENST00000403708 294 ntBASIC4.36□□□□□ -1.71
LIM2P55344 RN7SKP199-201ENST00000410325 305 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms