Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC008432.1-201ENST00000615912 1320 ntBASIC4.63□□□□□ -1.67
CDH11P55287 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CDH11P55287 CASC19-221ENST00000641309 1382 ntBASIC4.63□□□□□ -1.67
CDH11P55287 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CDH11P55287 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.63□□□□□ -1.67
CDH11P55287 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CDH11P55287 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CDH11P55287 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.62□□□□□ -1.67
CDH11P55287 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CDH11P55287 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
CDH11P55287 AC092747.4-201ENST00000620519 1861 ntBASIC4.62□□□□□ -1.67
CDH11P55287 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
CDH11P55287 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.62□□□□□ -1.67
CDH11P55287 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.62□□□□□ -1.67
CDH11P55287 AC000123.3-201ENST00000624029 4975 ntBASIC4.62□□□□□ -1.67
CDH11P55287 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CDH11P55287 RNU6-354P-201ENST00000383862 107 ntBASIC4.62□□□□□ -1.67
CDH11P55287 RNU6-610P-201ENST00000384264 107 ntBASIC4.62□□□□□ -1.67
CDH11P55287 RNU6-1005P-201ENST00000384519 107 ntBASIC4.62□□□□□ -1.67
CDH11P55287 MIR122-201ENST00000385044 85 ntBASIC4.62□□□□□ -1.67
CDH11P55287 MIR137-201ENST00000385223 102 ntBASIC4.62□□□□□ -1.67
CDH11P55287 RNU6-1000P-201ENST00000391066 106 ntBASIC4.62□□□□□ -1.67
CDH11P55287 MIR937-201ENST00000401271 86 ntBASIC4.62□□□□□ -1.67
CDH11P55287 RNU2-17P-201ENST00000410290 190 ntBASIC4.62□□□□□ -1.67
CDH11P55287 XKRYP4-201ENST00000414395 483 ntBASIC4.62□□□□□ -1.67
CDH11P55287 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.62□□□□□ -1.67
CDH11P55287 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.62□□□□□ -1.67
CDH11P55287 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.62□□□□□ -1.67
CDH11P55287 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.62□□□□□ -1.67
CDH11P55287 AC234781.4-201ENST00000419384 244 ntBASIC4.62□□□□□ -1.67
CDH11P55287 RPL36AP10-201ENST00000421785 322 ntBASIC4.62□□□□□ -1.67
CDH11P55287 AC013262.1-201ENST00000426710 252 ntBASIC4.62□□□□□ -1.67
CDH11P55287 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.62□□□□□ -1.67
CDH11P55287 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC4.62□□□□□ -1.67
CDH11P55287 AC005033.1-201ENST00000428904 813 ntBASIC4.62□□□□□ -1.67
CDH11P55287 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.62□□□□□ -1.67
CDH11P55287 HMGB3P10-201ENST00000434734 572 ntBASIC4.62□□□□□ -1.67
CDH11P55287 AL645931.1-201ENST00000439737 410 ntBASIC4.62□□□□□ -1.67
CDH11P55287 CEACAMP7-201ENST00000444105 496 ntBASIC4.62□□□□□ -1.67
CDH11P55287 AC023512.1-201ENST00000444513 499 ntBASIC4.62□□□□□ -1.67
CDH11P55287 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.62□□□□□ -1.67
CDH11P55287 XKRYP5-201ENST00000449659 483 ntBASIC4.62□□□□□ -1.67
CDH11P55287 AL389915.2-201ENST00000454576 441 ntBASIC4.62□□□□□ -1.67
CDH11P55287 AL356981.1-201ENST00000454879 684 ntBASIC4.62□□□□□ -1.67
CDH11P55287 GYG1P1-201ENST00000460864 698 ntBASIC4.62□□□□□ -1.67
CDH11P55287 AC008379.1-201ENST00000463655 464 ntBASIC4.62□□□□□ -1.67
CDH11P55287 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.62□□□□□ -1.67
CDH11P55287 RN7SL826P-201ENST00000479724 288 ntBASIC4.62□□□□□ -1.67
CDH11P55287 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.62□□□□□ -1.67
CDH11P55287 RN7SL808P-201ENST00000496066 299 ntBASIC4.62□□□□□ -1.67
CDH11P55287 OR5H3P-201ENST00000502817 919 ntBASIC4.62□□□□□ -1.67
CDH11P55287 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.62□□□□□ -1.67
CDH11P55287 AC025459.1-201ENST00000504072 156 ntBASIC4.62□□□□□ -1.67
CDH11P55287 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.62□□□□□ -1.67
CDH11P55287 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CDH11P55287 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CDH11P55287 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC4.62□□□□□ -1.67
CDH11P55287 CIR1P1-201ENST00000524055 1133 ntBASIC4.62□□□□□ -1.67
CDH11P55287 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.62□□□□□ -1.67
CDH11P55287 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.62□□□□□ -1.67
CDH11P55287 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC4.62□□□□□ -1.67
CDH11P55287 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.62□□□□□ -1.67
CDH11P55287 AC124283.4-201ENST00000581815 456 ntBASIC4.62□□□□□ -1.67
CDH11P55287 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC4.62□□□□□ -1.67
CDH11P55287 MIR4760-201ENST00000585040 80 ntBASIC4.62□□□□□ -1.67
CDH11P55287 AC023762.1-201ENST00000603280 584 ntBASIC4.62□□□□□ -1.67
CDH11P55287 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.62□□□□□ -1.67
CDH11P55287 AC021851.1-201ENST00000608537 1082 ntBASIC4.62□□□□□ -1.67
CDH11P55287 AC068870.2-201ENST00000620635 389 ntBASIC4.62□□□□□ -1.67
CDH11P55287 AC015871.5-202ENST00000623252 701 ntBASIC4.62□□□□□ -1.67
CDH11P55287 AC093875.1-201ENST00000623688 504 ntBASIC4.62□□□□□ -1.67
CDH11P55287 AC004808.1-201ENST00000627671 721 ntBASIC4.62□□□□□ -1.67
CDH11P55287 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.62□□□□□ -1.67
CDH11P55287 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC4.62□□□□□ -1.67
CDH11P55287 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.62□□□□□ -1.67
CDH11P55287 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.62□□□□□ -1.67
CDH11P55287 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
CDH11P55287 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CDH11P55287 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.62□□□□□ -1.67
CDH11P55287 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CDH11P55287 AC007342.7-201ENST00000624610 2337 ntBASIC4.62□□□□□ -1.67
CDH11P55287 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CDH11P55287 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CDH11P55287 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.62□□□□□ -1.67
CDH11P55287 AC053481.2-202ENST00000582394 1500 ntBASIC4.62□□□□□ -1.67
CDH11P55287 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.62□□□□□ -1.67
CDH11P55287 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
CDH11P55287 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
CDH11P55287 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.61□□□□□ -1.67
CDH11P55287 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
CDH11P55287 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CDH11P55287 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CDH11P55287 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CDH11P55287 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
CDH11P55287 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CDH11P55287 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.61□□□□□ -1.67
CDH11P55287 AC107068.1-201ENST00000563286 4218 ntBASIC4.61□□□□□ -1.67
CDH11P55287 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
CDH11P55287 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CDH11P55287 SNORA17.1-201ENST00000362945 126 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 156.7 ms