Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC6.34□□□□□ -1.39
MRE11P49959 MTND1P34-201ENST00000438556 671 ntBASIC6.34□□□□□ -1.39
MRE11P49959 CYCSP24-201ENST00000445119 316 ntBASIC6.34□□□□□ -1.39
MRE11P49959 MTND6P5-201ENST00000448266 512 ntBASIC6.34□□□□□ -1.39
MRE11P49959 ART2BP-201ENST00000453501 499 ntBASIC6.34□□□□□ -1.39
MRE11P49959 PTGES3P5-201ENST00000455109 434 ntBASIC6.34□□□□□ -1.39
MRE11P49959 RPL21P47-201ENST00000483696 477 ntBASIC6.34□□□□□ -1.39
MRE11P49959 AC007686.1-201ENST00000488511 463 ntBASIC6.34□□□□□ -1.39
MRE11P49959 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC6.34□□□□□ -1.39
MRE11P49959 RN7SL346P-201ENST00000491561 294 ntBASIC6.34□□□□□ -1.39
MRE11P49959 RPL21P131-201ENST00000497298 483 ntBASIC6.34□□□□□ -1.39
MRE11P49959 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.34□□□□□ -1.39
MRE11P49959 AC118282.2-201ENST00000508739 374 ntBASIC6.34□□□□□ -1.39
MRE11P49959 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC6.34□□□□□ -1.39
MRE11P49959 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC6.34□□□□□ -1.39
MRE11P49959 AC074087.1-201ENST00000512059 724 ntBASIC6.34□□□□□ -1.39
MRE11P49959 AL117351.2-201ENST00000513571 157 ntBASIC6.34□□□□□ -1.39
MRE11P49959 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.34□□□□□ -1.39
MRE11P49959 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
MRE11P49959 PMS2P3-207ENST00000529061 717 ntBASIC6.34□□□□□ -1.39
MRE11P49959 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC6.34□□□□□ -1.39
MRE11P49959 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.34□□□□□ -1.39
MRE11P49959 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC6.34□□□□□ -1.39
MRE11P49959 DPRXP4-201ENST00000578053 568 ntBASIC6.34□□□□□ -1.39
MRE11P49959 AP005136.1-201ENST00000579765 429 ntBASIC6.34□□□□□ -1.39
MRE11P49959 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.34□□□□□ -1.39
MRE11P49959 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC6.34□□□□□ -1.39
MRE11P49959 AC006272.2-201ENST00000594725 163 ntBASIC6.34□□□□□ -1.39
MRE11P49959 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC6.34□□□□□ -1.39
MRE11P49959 AC124856.1-201ENST00000600819 896 ntBASIC6.34□□□□□ -1.39
MRE11P49959 AC013562.2-201ENST00000611632 603 ntBASIC6.34□□□□□ -1.39
MRE11P49959 MIR6793-201ENST00000612376 63 ntBASIC6.34□□□□□ -1.39
MRE11P49959 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC6.34□□□□□ -1.39
MRE11P49959 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC6.34□□□□□ -1.39
MRE11P49959 OR55B1P-203ENST00000641518 2602 ntBASIC6.34□□□□□ -1.39
MRE11P49959 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
MRE11P49959 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.34□□□□□ -1.39
MRE11P49959 AC131971.1-201ENST00000332881 1482 ntBASIC6.34□□□□□ -1.4
MRE11P49959 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC6.34□□□□□ -1.4
MRE11P49959 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC6.34□□□□□ -1.4
MRE11P49959 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC6.33□□□□□ -1.4
MRE11P49959 SNORD56.6-201ENST00000384569 71 ntBASIC6.33□□□□□ -1.4
MRE11P49959 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
MRE11P49959 RNU4-22P-201ENST00000411058 166 ntBASIC6.33□□□□□ -1.4
MRE11P49959 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC6.33□□□□□ -1.4
MRE11P49959 HMGB1P49-201ENST00000418882 569 ntBASIC6.33□□□□□ -1.4
MRE11P49959 AC234781.4-201ENST00000419384 244 ntBASIC6.33□□□□□ -1.4
MRE11P49959 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC6.33□□□□□ -1.4
MRE11P49959 MTND1P20-201ENST00000430341 950 ntBASIC6.33□□□□□ -1.4
MRE11P49959 NDUFA5P10-201ENST00000432147 357 ntBASIC6.33□□□□□ -1.4
MRE11P49959 AC007563.3-201ENST00000433233 371 ntBASIC6.33□□□□□ -1.4
MRE11P49959 AC005077.1-201ENST00000449226 375 ntBASIC6.33□□□□□ -1.4
MRE11P49959 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC6.33□□□□□ -1.4
MRE11P49959 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
MRE11P49959 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC6.33□□□□□ -1.4
MRE11P49959 AC023245.1-201ENST00000468501 517 ntBASIC6.33□□□□□ -1.4
MRE11P49959 RPL7P6-201ENST00000480903 738 ntBASIC6.33□□□□□ -1.4
MRE11P49959 RN7SL184P-201ENST00000488308 297 ntBASIC6.33□□□□□ -1.4
MRE11P49959 AC090638.1-201ENST00000498296 909 ntBASIC6.33□□□□□ -1.4
MRE11P49959 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC6.33□□□□□ -1.4
MRE11P49959 HIGD1AP14-201ENST00000507617 282 ntBASIC6.33□□□□□ -1.4
MRE11P49959 MTND4P2-201ENST00000507767 1203 ntBASIC6.33□□□□□ -1.4
MRE11P49959 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC6.33□□□□□ -1.4
MRE11P49959 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
MRE11P49959 HMGN1P9-201ENST00000515212 298 ntBASIC6.33□□□□□ -1.4
MRE11P49959 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC6.33□□□□□ -1.4
MRE11P49959 AC023050.2-201ENST00000544968 387 ntBASIC6.33□□□□□ -1.4
MRE11P49959 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.33□□□□□ -1.4
MRE11P49959 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC6.33□□□□□ -1.4
MRE11P49959 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
MRE11P49959 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC6.33□□□□□ -1.4
MRE11P49959 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC6.33□□□□□ -1.4
MRE11P49959 AC061975.8-201ENST00000587058 721 ntBASIC6.33□□□□□ -1.4
MRE11P49959 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC6.33□□□□□ -1.4
MRE11P49959 VN1R9P-201ENST00000614184 867 ntBASIC6.33□□□□□ -1.4
MRE11P49959 AL139099.4-201ENST00000614802 114 ntBASIC6.33□□□□□ -1.4
MRE11P49959 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
MRE11P49959 AC022106.2-201ENST00000620114 757 ntBASIC6.33□□□□□ -1.4
MRE11P49959 AP002782.1-201ENST00000623107 614 ntBASIC6.33□□□□□ -1.4
MRE11P49959 OR11H2-202ENST00000641517 1085 ntBASIC6.33□□□□□ -1.4
MRE11P49959 OR8G3P-202ENST00000641572 1255 ntBASIC6.33□□□□□ -1.4
MRE11P49959 LINC02211-204ENST00000642024 1070 ntBASIC6.33□□□□□ -1.4
MRE11P49959 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
MRE11P49959 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
MRE11P49959 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
MRE11P49959 AL360270.2-201ENST00000562952 5985 ntBASIC6.33□□□□□ -1.4
MRE11P49959 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
MRE11P49959 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC6.33□□□□□ -1.4
MRE11P49959 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
MRE11P49959 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
MRE11P49959 AC003973.3-201ENST00000624863 2822 ntBASIC6.33□□□□□ -1.4
MRE11P49959 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
MRE11P49959 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
MRE11P49959 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
MRE11P49959 AC021755.1-201ENST00000559747 1447 ntBASIC6.33□□□□□ -1.4
MRE11P49959 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
MRE11P49959 GNL2P1-201ENST00000451274 2190 ntBASIC6.33□□□□□ -1.4
MRE11P49959 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
MRE11P49959 ERVFRD-3-201ENST00000578561 1617 ntBASIC6.32□□□□□ -1.4
MRE11P49959 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms