Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AL117339.4-201ENST00000608335 7063 ntBASIC7.18□□□□□ -1.26
VARSP26640 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
VARSP26640 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
VARSP26640 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
VARSP26640 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC7.18□□□□□ -1.26
VARSP26640 RBMX2P2-201ENST00000257020 946 ntBASIC7.18□□□□□ -1.26
VARSP26640 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
VARSP26640 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
VARSP26640 Y_RNA.47-201ENST00000362697 108 ntBASIC7.18□□□□□ -1.26
VARSP26640 RNU6-831P-201ENST00000384548 107 ntBASIC7.18□□□□□ -1.26
VARSP26640 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC7.18□□□□□ -1.26
VARSP26640 CHEK2P3-201ENST00000416118 248 ntBASIC7.18□□□□□ -1.26
VARSP26640 AC009302.1-201ENST00000417147 390 ntBASIC7.18□□□□□ -1.26
VARSP26640 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC7.18□□□□□ -1.26
VARSP26640 Z83313.1-201ENST00000433780 718 ntBASIC7.18□□□□□ -1.26
VARSP26640 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC7.18□□□□□ -1.26
VARSP26640 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC7.18□□□□□ -1.26
VARSP26640 RPS15AP9-201ENST00000439856 381 ntBASIC7.18□□□□□ -1.26
VARSP26640 AL592114.2-201ENST00000440142 532 ntBASIC7.18□□□□□ -1.26
VARSP26640 RPS7P4-201ENST00000444127 582 ntBASIC7.18□□□□□ -1.26
VARSP26640 ZNF385D-AS2-202ENST00000448980 370 ntTSL 3 BASIC7.18□□□□□ -1.26
VARSP26640 AL591379.2-201ENST00000450223 397 ntBASIC7.18□□□□□ -1.26
VARSP26640 AL645937.3-201ENST00000453647 936 ntBASIC7.18□□□□□ -1.26
VARSP26640 SBDSP1-204ENST00000453858 737 ntBASIC7.18□□□□□ -1.26
VARSP26640 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC7.18□□□□□ -1.26
VARSP26640 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC7.18□□□□□ -1.26
VARSP26640 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC7.18□□□□□ -1.26
VARSP26640 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC7.18□□□□□ -1.26
VARSP26640 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC7.18□□□□□ -1.26
VARSP26640 SMURF2P1-201ENST00000514992 481 ntBASIC7.18□□□□□ -1.26
VARSP26640 RFPL4AP3-201ENST00000515267 345 ntBASIC7.18□□□□□ -1.26
VARSP26640 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC7.18□□□□□ -1.26
VARSP26640 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC7.18□□□□□ -1.26
VARSP26640 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC7.18□□□□□ -1.26
VARSP26640 PTP4A1P6-201ENST00000531034 478 ntBASIC7.18□□□□□ -1.26
VARSP26640 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC7.18□□□□□ -1.26
VARSP26640 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC7.18□□□□□ -1.26
VARSP26640 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC7.18□□□□□ -1.26
VARSP26640 AC099518.1-201ENST00000568032 841 ntTSL 3 BASIC7.18□□□□□ -1.26
VARSP26640 HMGB1P6-201ENST00000569046 646 ntBASIC7.18□□□□□ -1.26
VARSP26640 MIR3167-201ENST00000579623 85 ntBASIC7.18□□□□□ -1.26
VARSP26640 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC7.18□□□□□ -1.26
VARSP26640 AL022238.3-201ENST00000609279 443 ntBASIC7.18□□□□□ -1.26
VARSP26640 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC7.18□□□□□ -1.26
VARSP26640 AC090510.2-201ENST00000617465 629 ntBASIC7.18□□□□□ -1.26
VARSP26640 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC7.18□□□□□ -1.26
VARSP26640 AC026634.1-201ENST00000634369 198 ntBASIC7.18□□□□□ -1.26
VARSP26640 AC243725.1-201ENST00000637164 436 ntBASIC7.18□□□□□ -1.26
VARSP26640 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC7.18□□□□□ -1.26
VARSP26640 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
VARSP26640 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
VARSP26640 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
VARSP26640 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
VARSP26640 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC7.18□□□□□ -1.26
VARSP26640 AC116158.1-201ENST00000560231 2129 ntBASIC7.18□□□□□ -1.26
VARSP26640 ADAM7-203ENST00000441335 1417 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
VARSP26640 AP000547.3-204ENST00000588548 2523 ntBASIC7.18□□□□□ -1.26
VARSP26640 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
VARSP26640 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
VARSP26640 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
VARSP26640 AC217777.1-201ENST00000570034 1471 ntBASIC7.17□□□□□ -1.26
VARSP26640 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
VARSP26640 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC7.17□□□□□ -1.26
VARSP26640 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
VARSP26640 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
VARSP26640 AP003471.1-202ENST00000319051 1988 ntBASIC7.17□□□□□ -1.26
VARSP26640 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC7.17□□□□□ -1.26
VARSP26640 DDX50P1-201ENST00000438163 2400 ntBASIC7.17□□□□□ -1.26
VARSP26640 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
VARSP26640 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC7.17□□□□□ -1.26
VARSP26640 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
VARSP26640 RN7SKP63-201ENST00000363187 301 ntBASIC7.17□□□□□ -1.26
VARSP26640 RN7SKP174-201ENST00000363803 330 ntBASIC7.17□□□□□ -1.26
VARSP26640 AL451142.1-201ENST00000375867 775 ntBASIC7.17□□□□□ -1.26
VARSP26640 RNU6-532P-201ENST00000384318 107 ntBASIC7.17□□□□□ -1.26
VARSP26640 RN7SKP131-201ENST00000410698 301 ntBASIC7.17□□□□□ -1.26
VARSP26640 RNU4-14P-201ENST00000410858 122 ntBASIC7.17□□□□□ -1.26
VARSP26640 RN7SKP30-201ENST00000411373 334 ntBASIC7.17□□□□□ -1.26
VARSP26640 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC7.17□□□□□ -1.26
VARSP26640 HSPE1P1-201ENST00000421494 318 ntBASIC7.17□□□□□ -1.26
VARSP26640 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC7.17□□□□□ -1.26
VARSP26640 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC7.17□□□□□ -1.26
VARSP26640 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC7.17□□□□□ -1.26
VARSP26640 AF274573.1-201ENST00000430535 494 ntBASIC7.17□□□□□ -1.26
VARSP26640 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC7.17□□□□□ -1.26
VARSP26640 TXNP5-201ENST00000441043 315 ntBASIC7.17□□□□□ -1.26
VARSP26640 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC7.17□□□□□ -1.26
VARSP26640 AC108868.2-201ENST00000451464 511 ntTSL 2 BASIC7.17□□□□□ -1.26
VARSP26640 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC7.17□□□□□ -1.26
VARSP26640 Y_RNA.635-201ENST00000459041 101 ntBASIC7.17□□□□□ -1.26
VARSP26640 RPL34P34-201ENST00000465389 354 ntBASIC7.17□□□□□ -1.26
VARSP26640 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC7.17□□□□□ -1.26
VARSP26640 AC012181.1-201ENST00000479895 423 ntBASIC7.17□□□□□ -1.26
VARSP26640 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC7.17□□□□□ -1.26
VARSP26640 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC7.17□□□□□ -1.26
VARSP26640 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC7.17□□□□□ -1.26
VARSP26640 TTC39CP1-201ENST00000512513 755 ntBASIC7.17□□□□□ -1.26
VARSP26640 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC7.17□□□□□ -1.26
VARSP26640 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC7.17□□□□□ -1.26
VARSP26640 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms