Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 LINC00993-201ENST00000420453 540 ntBASIC4.69□□□□□ -1.66
XRCC1P18887 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.69□□□□□ -1.66
XRCC1P18887 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.69□□□□□ -1.66
XRCC1P18887 OR2B7P-201ENST00000429302 934 ntBASIC4.69□□□□□ -1.66
XRCC1P18887 AL451139.1-201ENST00000434718 346 ntBASIC4.69□□□□□ -1.66
XRCC1P18887 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.69□□□□□ -1.66
XRCC1P18887 RPL36AP15-201ENST00000444514 266 ntBASIC4.69□□□□□ -1.66
XRCC1P18887 RPL31P20-201ENST00000449593 360 ntBASIC4.69□□□□□ -1.66
XRCC1P18887 AC010733.1-201ENST00000451515 401 ntBASIC4.69□□□□□ -1.66
XRCC1P18887 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.69□□□□□ -1.66
XRCC1P18887 AC022795.1-201ENST00000473808 480 ntBASIC4.69□□□□□ -1.66
XRCC1P18887 AK4P6-201ENST00000505168 528 ntBASIC4.69□□□□□ -1.66
XRCC1P18887 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.69□□□□□ -1.66
XRCC1P18887 SEC11B-201ENST00000518383 499 ntBASIC4.69□□□□□ -1.66
XRCC1P18887 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.69□□□□□ -1.66
XRCC1P18887 AC133555.2-201ENST00000550213 292 ntBASIC4.69□□□□□ -1.66
XRCC1P18887 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.69□□□□□ -1.66
XRCC1P18887 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.69□□□□□ -1.66
XRCC1P18887 AC079075.1-201ENST00000559543 878 ntBASIC4.69□□□□□ -1.66
XRCC1P18887 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.69□□□□□ -1.66
XRCC1P18887 AC009268.1-201ENST00000561352 1203 ntBASIC4.69□□□□□ -1.66
XRCC1P18887 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.69□□□□□ -1.66
XRCC1P18887 RN7SL802P-201ENST00000577858 299 ntBASIC4.69□□□□□ -1.66
XRCC1P18887 MIR5699-201ENST00000578903 90 ntBASIC4.69□□□□□ -1.66
XRCC1P18887 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
XRCC1P18887 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
XRCC1P18887 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
XRCC1P18887 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.69□□□□□ -1.66
XRCC1P18887 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.69□□□□□ -1.66
XRCC1P18887 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
XRCC1P18887 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.69□□□□□ -1.66
XRCC1P18887 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
XRCC1P18887 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
XRCC1P18887 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
XRCC1P18887 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
XRCC1P18887 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.69□□□□□ -1.66
XRCC1P18887 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
XRCC1P18887 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
XRCC1P18887 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
XRCC1P18887 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
XRCC1P18887 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
XRCC1P18887 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
XRCC1P18887 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
XRCC1P18887 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
XRCC1P18887 AC007382.1-201ENST00000624376 2618 ntBASIC4.68□□□□□ -1.66
XRCC1P18887 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.68□□□□□ -1.66
XRCC1P18887 SCN1A-220ENST00000641603 12506 ntBASIC4.68□□□□□ -1.66
XRCC1P18887 RNA5SP443-201ENST00000363083 132 ntBASIC4.68□□□□□ -1.66
XRCC1P18887 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.68□□□□□ -1.66
XRCC1P18887 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
XRCC1P18887 RNU6-1263P-201ENST00000384601 106 ntBASIC4.68□□□□□ -1.66
XRCC1P18887 RNA5SP105-201ENST00000391123 113 ntBASIC4.68□□□□□ -1.66
XRCC1P18887 RPS4XP9-201ENST00000405151 780 ntBASIC4.68□□□□□ -1.66
XRCC1P18887 RNU6-564P-201ENST00000410983 104 ntBASIC4.68□□□□□ -1.66
XRCC1P18887 RSU1P3-201ENST00000412878 835 ntBASIC4.68□□□□□ -1.66
XRCC1P18887 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.68□□□□□ -1.66
XRCC1P18887 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.68□□□□□ -1.66
XRCC1P18887 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.68□□□□□ -1.66
XRCC1P18887 AC245028.1-201ENST00000423259 256 ntBASIC4.68□□□□□ -1.66
XRCC1P18887 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.68□□□□□ -1.66
XRCC1P18887 RPS17P8-201ENST00000434525 335 ntBASIC4.68□□□□□ -1.66
XRCC1P18887 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.68□□□□□ -1.66
XRCC1P18887 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.68□□□□□ -1.66
XRCC1P18887 CEACAMP9-201ENST00000442990 513 ntBASIC4.68□□□□□ -1.66
XRCC1P18887 AC073264.2-201ENST00000448886 166 ntBASIC4.68□□□□□ -1.66
XRCC1P18887 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.68□□□□□ -1.66
XRCC1P18887 RPS6P2-201ENST00000454208 705 ntBASIC4.68□□□□□ -1.66
XRCC1P18887 AC005008.1-201ENST00000456151 612 ntBASIC4.68□□□□□ -1.66
XRCC1P18887 RNU1-6P-201ENST00000516290 144 ntBASIC4.68□□□□□ -1.66
XRCC1P18887 RNU6-709P-201ENST00000517257 104 ntBASIC4.68□□□□□ -1.66
XRCC1P18887 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.68□□□□□ -1.66
XRCC1P18887 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.68□□□□□ -1.66
XRCC1P18887 AP006289.1-201ENST00000538089 277 ntBASIC4.68□□□□□ -1.66
XRCC1P18887 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.68□□□□□ -1.66
XRCC1P18887 AC005229.3-201ENST00000603438 323 ntBASIC4.68□□□□□ -1.66
XRCC1P18887 AC022387.2-201ENST00000604050 448 ntBASIC4.68□□□□□ -1.66
XRCC1P18887 AC098935.2-201ENST00000604222 466 ntBASIC4.68□□□□□ -1.66
XRCC1P18887 AC091979.2-201ENST00000607514 214 ntBASIC4.68□□□□□ -1.66
XRCC1P18887 MIR6853-201ENST00000619642 74 ntBASIC4.68□□□□□ -1.66
XRCC1P18887 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.68□□□□□ -1.66
XRCC1P18887 AL596275.2-204ENST00000641628 552 ntBASIC4.68□□□□□ -1.66
XRCC1P18887 AL596275.2-206ENST00000641957 626 ntBASIC4.68□□□□□ -1.66
XRCC1P18887 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
XRCC1P18887 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
XRCC1P18887 TLK1P1-201ENST00000456760 2440 ntBASIC4.68□□□□□ -1.66
XRCC1P18887 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
XRCC1P18887 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
XRCC1P18887 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.68□□□□□ -1.66
XRCC1P18887 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
XRCC1P18887 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
XRCC1P18887 MFSD8-216ENST00000641147 4009 ntBASIC4.67□□□□□ -1.66
XRCC1P18887 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
XRCC1P18887 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.67□□□□□ -1.66
XRCC1P18887 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.67□□□□□ -1.66
XRCC1P18887 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
XRCC1P18887 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
XRCC1P18887 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
XRCC1P18887 RNU6-1320P-201ENST00000390838 107 ntBASIC4.67□□□□□ -1.66
XRCC1P18887 RNU6-1269P-201ENST00000391139 107 ntBASIC4.67□□□□□ -1.66
XRCC1P18887 RPS16P5-201ENST00000406501 404 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms