Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 RPS10P21-201ENST00000430654 475 ntBASIC5.78□□□□□ -1.48
ATF4P18848 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
ATF4P18848 RPS21P1-201ENST00000434479 247 ntBASIC5.78□□□□□ -1.48
ATF4P18848 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC5.78□□□□□ -1.48
ATF4P18848 ARPC3P1-201ENST00000437218 533 ntBASIC5.78□□□□□ -1.48
ATF4P18848 TULP3P1-201ENST00000442322 816 ntTSL 3 BASIC5.78□□□□□ -1.48
ATF4P18848 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC5.78□□□□□ -1.48
ATF4P18848 FAM103A2P-201ENST00000444122 354 ntBASIC5.78□□□□□ -1.48
ATF4P18848 GEMIN8P3-201ENST00000445417 720 ntBASIC5.78□□□□□ -1.48
ATF4P18848 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC5.78□□□□□ -1.48
ATF4P18848 GAPDHP17-201ENST00000449858 1001 ntBASIC5.78□□□□□ -1.48
ATF4P18848 OFD1P4Y-201ENST00000455273 1179 ntBASIC5.78□□□□□ -1.48
ATF4P18848 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.78□□□□□ -1.48
ATF4P18848 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC5.78□□□□□ -1.48
ATF4P18848 RN7SL233P-201ENST00000469988 277 ntBASIC5.78□□□□□ -1.48
ATF4P18848 PDPN-205ENST00000487038 607 ntTSL 2 BASIC5.78□□□□□ -1.48
ATF4P18848 HMGB1P36-201ENST00000487709 576 ntBASIC5.78□□□□□ -1.48
ATF4P18848 AC127024.1-201ENST00000490847 418 ntBASIC5.78□□□□□ -1.48
ATF4P18848 AC026826.1-201ENST00000493002 361 ntBASIC5.78□□□□□ -1.48
ATF4P18848 AC079768.1-201ENST00000503181 711 ntBASIC5.78□□□□□ -1.48
ATF4P18848 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC5.78□□□□□ -1.48
ATF4P18848 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC5.78□□□□□ -1.48
ATF4P18848 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.78□□□□□ -1.48
ATF4P18848 RNU6-714P-201ENST00000516963 103 ntBASIC5.78□□□□□ -1.48
ATF4P18848 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC5.78□□□□□ -1.48
ATF4P18848 AC087752.2-201ENST00000521219 281 ntBASIC5.78□□□□□ -1.48
ATF4P18848 MED28P5-201ENST00000528254 438 ntBASIC5.78□□□□□ -1.48
ATF4P18848 AC068631.3-201ENST00000538831 225 ntBASIC5.78□□□□□ -1.48
ATF4P18848 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC5.78□□□□□ -1.48
ATF4P18848 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.78□□□□□ -1.48
ATF4P18848 C12orf77-202ENST00000549262 1443 ntTSL 4 BASIC5.78□□□□□ -1.48
ATF4P18848 RNASE11-206ENST00000553849 1101 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
ATF4P18848 AC027020.1-202ENST00000557839 429 ntTSL 5 BASIC5.78□□□□□ -1.48
ATF4P18848 AC092757.2-201ENST00000559026 633 ntTSL 4 BASIC5.78□□□□□ -1.48
ATF4P18848 AC138749.2-201ENST00000566048 167 ntBASIC5.78□□□□□ -1.48
ATF4P18848 AL391840.1-201ENST00000571144 367 ntBASIC5.78□□□□□ -1.48
ATF4P18848 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.78□□□□□ -1.48
ATF4P18848 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC5.78□□□□□ -1.48
ATF4P18848 RN7SL25P-201ENST00000583862 260 ntBASIC5.78□□□□□ -1.48
ATF4P18848 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.78□□□□□ -1.48
ATF4P18848 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC5.78□□□□□ -1.48
ATF4P18848 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC5.78□□□□□ -1.48
ATF4P18848 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC5.78□□□□□ -1.48
ATF4P18848 AC005518.2-201ENST00000603254 282 ntBASIC5.78□□□□□ -1.48
ATF4P18848 AC073389.2-201ENST00000606726 571 ntTSL 4 BASIC5.78□□□□□ -1.48
ATF4P18848 AC108861.1-201ENST00000611634 585 ntTSL 4 BASIC5.78□□□□□ -1.48
ATF4P18848 AL158209.2-201ENST00000619266 216 ntBASIC5.78□□□□□ -1.48
ATF4P18848 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ATF4P18848 PPP1R1C-202ENST00000409137 3004 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ATF4P18848 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ATF4P18848 AC004158.1-201ENST00000564508 4319 ntBASIC5.78□□□□□ -1.48
ATF4P18848 CENPN-205ENST00000439957 1699 ntTSL 2 BASIC5.78□□□□□ -1.48
ATF4P18848 AC092447.10-201ENST00000620607 1652 ntBASIC5.78□□□□□ -1.48
ATF4P18848 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.78□□□□□ -1.48
ATF4P18848 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
ATF4P18848 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
ATF4P18848 S100Z-201ENST00000317593 1468 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
ATF4P18848 KPNA2P2-201ENST00000419546 1489 ntBASIC5.77□□□□□ -1.49
ATF4P18848 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
ATF4P18848 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
ATF4P18848 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
ATF4P18848 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
ATF4P18848 OR5M2P-202ENST00000641241 4242 ntBASIC5.77□□□□□ -1.49
ATF4P18848 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
ATF4P18848 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
ATF4P18848 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
ATF4P18848 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
ATF4P18848 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
ATF4P18848 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC5.77□□□□□ -1.49
ATF4P18848 INSL5-201ENST00000304526 715 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
ATF4P18848 PPIAP24-201ENST00000328558 471 ntBASIC5.77□□□□□ -1.49
ATF4P18848 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.77□□□□□ -1.49
ATF4P18848 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.77□□□□□ -1.49
ATF4P18848 RNA5SP463-201ENST00000363030 120 ntBASIC5.77□□□□□ -1.49
ATF4P18848 RNA5SP394-201ENST00000364216 119 ntBASIC5.77□□□□□ -1.49
ATF4P18848 RNVU1-3-201ENST00000364313 161 ntBASIC5.77□□□□□ -1.49
ATF4P18848 SNORD82-201ENST00000365530 70 ntBASIC5.77□□□□□ -1.49
ATF4P18848 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
ATF4P18848 COQ3-202ENST00000369240 646 ntTSL 5 BASIC5.77□□□□□ -1.49
ATF4P18848 SP140-202ENST00000373645 814 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
ATF4P18848 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.77□□□□□ -1.49
ATF4P18848 MIR106B-201ENST00000385301 82 ntBASIC5.77□□□□□ -1.49
ATF4P18848 AAMDC-202ENST00000393427 531 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
ATF4P18848 RPL23A-203ENST00000394938 688 ntTSL 2 BASIC5.77□□□□□ -1.49
ATF4P18848 RPL17P50-201ENST00000396131 546 ntBASIC5.77□□□□□ -1.49
ATF4P18848 AL356421.1-201ENST00000403255 413 ntBASIC5.77□□□□□ -1.49
ATF4P18848 PKMP3-201ENST00000405497 715 ntBASIC5.77□□□□□ -1.49
ATF4P18848 MIR1231-201ENST00000408101 92 ntBASIC5.77□□□□□ -1.49
ATF4P18848 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.77□□□□□ -1.49
ATF4P18848 RN7SKP188-201ENST00000410789 317 ntBASIC5.77□□□□□ -1.49
ATF4P18848 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
ATF4P18848 RPL31P2-201ENST00000413849 377 ntBASIC5.77□□□□□ -1.49
ATF4P18848 OR10U1P-201ENST00000414690 905 ntBASIC5.77□□□□□ -1.49
ATF4P18848 CRIP1P3-201ENST00000416794 220 ntBASIC5.77□□□□□ -1.49
ATF4P18848 AL390840.1-201ENST00000420303 988 ntBASIC5.77□□□□□ -1.49
ATF4P18848 AC064875.1-203ENST00000422996 582 ntTSL 4 BASIC5.77□□□□□ -1.49
ATF4P18848 RPL30P3-201ENST00000424262 333 ntBASIC5.77□□□□□ -1.49
ATF4P18848 AL157884.1-201ENST00000424561 454 ntBASIC5.77□□□□□ -1.49
ATF4P18848 RPS27AP6-201ENST00000427962 448 ntBASIC5.77□□□□□ -1.49
ATF4P18848 AL157402.1-201ENST00000429469 363 ntTSL 3 BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms