Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CCL3L1P16619 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCL3L1P16619 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
CCL3L1P16619 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
CCL3L1P16619 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCL3L1P16619 SUPT16HP1-201ENST00000537175 3133 ntBASIC3.61□□□□□ -1.83
CCL3L1P16619 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCL3L1P16619 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
CCL3L1P16619 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCL3L1P16619 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCL3L1P16619 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCL3L1P16619 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCL3L1P16619 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC3.6□□□□□ -1.83
CCL3L1P16619 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCL3L1P16619 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCL3L1P16619 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
CCL3L1P16619 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC3.6□□□□□ -1.83
CCL3L1P16619 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC3.6□□□□□ -1.83
CCL3L1P16619 AC010132.2-201ENST00000295493 1043 ntBASIC3.6□□□□□ -1.83
CCL3L1P16619 RNU4-39P-201ENST00000362455 127 ntBASIC3.6□□□□□ -1.83
CCL3L1P16619 RNU1-32P-201ENST00000363937 159 ntBASIC3.6□□□□□ -1.83
CCL3L1P16619 MIR1911-201ENST00000410783 80 ntBASIC3.6□□□□□ -1.83
CCL3L1P16619 SNORA74C-2-201ENST00000411179 201 ntBASIC3.6□□□□□ -1.83
CCL3L1P16619 CEACAMP8-201ENST00000413902 580 ntBASIC3.6□□□□□ -1.83
CCL3L1P16619 AL807761.1-201ENST00000417622 171 ntBASIC3.6□□□□□ -1.83
CCL3L1P16619 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC3.6□□□□□ -1.83
CCL3L1P16619 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CCL3L1P16619 CBX1P1-201ENST00000440184 427 ntBASIC3.6□□□□□ -1.83
CCL3L1P16619 AC114495.1-201ENST00000441274 436 ntBASIC3.6□□□□□ -1.83
CCL3L1P16619 FHP1-201ENST00000442741 703 ntBASIC3.6□□□□□ -1.83
CCL3L1P16619 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.6□□□□□ -1.83
CCL3L1P16619 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.6□□□□□ -1.83
CCL3L1P16619 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC3.6□□□□□ -1.83
CCL3L1P16619 EIF4A2P2-201ENST00000455776 1070 ntBASIC3.6□□□□□ -1.83
CCL3L1P16619 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC3.6□□□□□ -1.83
CCL3L1P16619 RPL7P32-201ENST00000457119 744 ntBASIC3.6□□□□□ -1.83
CCL3L1P16619 RN7SL98P-201ENST00000462271 300 ntBASIC3.6□□□□□ -1.83
CCL3L1P16619 DEFB109F-201ENST00000491870 277 ntBASIC3.6□□□□□ -1.83
CCL3L1P16619 RN7SL812P-201ENST00000493791 279 ntBASIC3.6□□□□□ -1.83
CCL3L1P16619 ASNSP4-201ENST00000511103 447 ntBASIC3.6□□□□□ -1.83
CCL3L1P16619 AC010476.1-201ENST00000519111 851 ntBASIC3.6□□□□□ -1.83
CCL3L1P16619 RAB9BP1-201ENST00000519581 626 ntBASIC3.6□□□□□ -1.83
CCL3L1P16619 AC090151.1-201ENST00000520784 730 ntBASIC3.6□□□□□ -1.83
CCL3L1P16619 OSBPL9P2-201ENST00000526582 1228 ntBASIC3.6□□□□□ -1.83
CCL3L1P16619 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CCL3L1P16619 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC3.6□□□□□ -1.83
CCL3L1P16619 MIR4277-201ENST00000578298 84 ntBASIC3.6□□□□□ -1.83
CCL3L1P16619 RPL26P30-202ENST00000602923 645 ntBASIC3.6□□□□□ -1.83
CCL3L1P16619 AL354984.3-201ENST00000604803 325 ntBASIC3.6□□□□□ -1.83
CCL3L1P16619 AC113403.1-201ENST00000604910 193 ntBASIC3.6□□□□□ -1.83
CCL3L1P16619 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.6□□□□□ -1.83
CCL3L1P16619 BNIP3P41-202ENST00000616656 861 ntBASIC3.6□□□□□ -1.83
CCL3L1P16619 AL138721.1-201ENST00000616756 179 ntBASIC3.6□□□□□ -1.83
CCL3L1P16619 AL035461.2-201ENST00000619201 524 ntBASIC3.6□□□□□ -1.83
CCL3L1P16619 FP325313.1-201ENST00000638228 703 ntBASIC3.6□□□□□ -1.83
CCL3L1P16619 AL513548.1-201ENST00000562904 1724 ntBASIC3.6□□□□□ -1.83
CCL3L1P16619 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CCL3L1P16619 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC3.6□□□□□ -1.83
CCL3L1P16619 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.6□□□□□ -1.83
CCL3L1P16619 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC3.6□□□□□ -1.83
CCL3L1P16619 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCL3L1P16619 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCL3L1P16619 TCP1P3-201ENST00000414406 1498 ntBASIC3.6□□□□□ -1.83
CCL3L1P16619 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCL3L1P16619 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CCL3L1P16619 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CCL3L1P16619 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
CCL3L1P16619 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CCL3L1P16619 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CCL3L1P16619 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC3.59□□□□□ -1.83
CCL3L1P16619 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
CCL3L1P16619 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CCL3L1P16619 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC3.59□□□□□ -1.83
CCL3L1P16619 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.59□□□□□ -1.83
CCL3L1P16619 RNA5SP22-201ENST00000365393 109 ntBASIC3.59□□□□□ -1.83
CCL3L1P16619 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
CCL3L1P16619 AL583835.1-201ENST00000399570 407 ntBASIC3.59□□□□□ -1.83
CCL3L1P16619 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.59□□□□□ -1.83
CCL3L1P16619 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC3.59□□□□□ -1.83
CCL3L1P16619 RPL12P34-201ENST00000424532 479 ntBASIC3.59□□□□□ -1.83
CCL3L1P16619 NFYAP1-201ENST00000431953 972 ntBASIC3.59□□□□□ -1.83
CCL3L1P16619 RPS3AP54-201ENST00000435535 734 ntBASIC3.59□□□□□ -1.83
CCL3L1P16619 RPL23AP52-201ENST00000439311 478 ntBASIC3.59□□□□□ -1.83
CCL3L1P16619 RPS4XP12-201ENST00000461747 709 ntBASIC3.59□□□□□ -1.83
CCL3L1P16619 RPL7P22-201ENST00000466005 733 ntBASIC3.59□□□□□ -1.83
CCL3L1P16619 AC011276.1-201ENST00000469688 323 ntBASIC3.59□□□□□ -1.83
CCL3L1P16619 RN7SL41P-201ENST00000476144 297 ntBASIC3.59□□□□□ -1.83
CCL3L1P16619 RN7SL810P-201ENST00000493031 276 ntBASIC3.59□□□□□ -1.83
CCL3L1P16619 AC025674.1-201ENST00000507074 324 ntBASIC3.59□□□□□ -1.83
CCL3L1P16619 NPM1P21-201ENST00000513394 762 ntBASIC3.59□□□□□ -1.83
CCL3L1P16619 IGKV1OR2-1-201ENST00000514060 354 ntBASIC3.59□□□□□ -1.83
CCL3L1P16619 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC3.59□□□□□ -1.83
CCL3L1P16619 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC3.59□□□□□ -1.83
CCL3L1P16619 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC3.59□□□□□ -1.83
CCL3L1P16619 AC009643.1-201ENST00000532030 391 ntBASIC3.59□□□□□ -1.83
CCL3L1P16619 AC068993.1-201ENST00000546724 589 ntBASIC3.59□□□□□ -1.83
CCL3L1P16619 AL352979.3-201ENST00000553515 247 ntBASIC3.59□□□□□ -1.83
CCL3L1P16619 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC3.59□□□□□ -1.83
CCL3L1P16619 RPL23AP97-201ENST00000568955 471 ntBASIC3.59□□□□□ -1.83
CCL3L1P16619 SLC25A36P1-201ENST00000590111 465 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms