Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC5.4□□□□□ -1.54
MMP3P08254 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.4□□□□□ -1.54
MMP3P08254 OR52A4P-201ENST00000472867 958 ntBASIC5.4□□□□□ -1.54
MMP3P08254 RFPL4AP3-201ENST00000515267 345 ntBASIC5.4□□□□□ -1.54
MMP3P08254 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC5.4□□□□□ -1.54
MMP3P08254 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.4□□□□□ -1.54
MMP3P08254 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC5.4□□□□□ -1.54
MMP3P08254 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.4□□□□□ -1.54
MMP3P08254 AC116553.2-201ENST00000564203 463 ntBASIC5.4□□□□□ -1.54
MMP3P08254 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.4□□□□□ -1.54
MMP3P08254 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC5.4□□□□□ -1.54
MMP3P08254 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC5.4□□□□□ -1.54
MMP3P08254 AC068620.3-201ENST00000602749 560 ntBASIC5.4□□□□□ -1.54
MMP3P08254 MTCO3P22-201ENST00000603219 784 ntBASIC5.4□□□□□ -1.54
MMP3P08254 AC004808.1-201ENST00000627671 721 ntBASIC5.4□□□□□ -1.54
MMP3P08254 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
MMP3P08254 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
MMP3P08254 RBPJP2-201ENST00000618187 1444 ntBASIC5.4□□□□□ -1.55
MMP3P08254 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
MMP3P08254 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
MMP3P08254 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
MMP3P08254 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
MMP3P08254 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.39□□□□□ -1.55
MMP3P08254 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
MMP3P08254 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.39□□□□□ -1.55
MMP3P08254 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
MMP3P08254 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
MMP3P08254 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.39□□□□□ -1.55
MMP3P08254 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
MMP3P08254 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.39□□□□□ -1.55
MMP3P08254 CASC19-261ENST00000641853 1638 ntBASIC5.39□□□□□ -1.55
MMP3P08254 RNU6-1000P-201ENST00000391066 106 ntBASIC5.39□□□□□ -1.55
MMP3P08254 RNU4-27P-201ENST00000410889 139 ntBASIC5.39□□□□□ -1.55
MMP3P08254 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.39□□□□□ -1.55
MMP3P08254 QRSL1P2-201ENST00000418582 964 ntBASIC5.39□□□□□ -1.55
MMP3P08254 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC5.39□□□□□ -1.55
MMP3P08254 CENPIP1-201ENST00000425713 902 ntBASIC5.39□□□□□ -1.55
MMP3P08254 RNFT1P2-201ENST00000443064 757 ntBASIC5.39□□□□□ -1.55
MMP3P08254 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
MMP3P08254 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.39□□□□□ -1.55
MMP3P08254 ENPP7P11-201ENST00000505915 627 ntBASIC5.39□□□□□ -1.55
MMP3P08254 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC5.39□□□□□ -1.55
MMP3P08254 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.39□□□□□ -1.55
MMP3P08254 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.39□□□□□ -1.55
MMP3P08254 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC5.39□□□□□ -1.55
MMP3P08254 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC5.39□□□□□ -1.55
MMP3P08254 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.39□□□□□ -1.55
MMP3P08254 MTND1P8-201ENST00000571424 950 ntBASIC5.39□□□□□ -1.55
MMP3P08254 MIR5699-201ENST00000578903 90 ntBASIC5.39□□□□□ -1.55
MMP3P08254 MIR4715-201ENST00000584117 79 ntBASIC5.39□□□□□ -1.55
MMP3P08254 AL121932.1-201ENST00000605542 214 ntBASIC5.39□□□□□ -1.55
MMP3P08254 AC026741.1-201ENST00000605892 482 ntBASIC5.39□□□□□ -1.55
MMP3P08254 AC034236.3-201ENST00000605999 461 ntBASIC5.39□□□□□ -1.55
MMP3P08254 AC112503.2-201ENST00000609005 552 ntBASIC5.39□□□□□ -1.55
MMP3P08254 AC004241.3-201ENST00000611728 517 ntBASIC5.39□□□□□ -1.55
MMP3P08254 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.39□□□□□ -1.55
MMP3P08254 AL133370.2-201ENST00000619934 439 ntBASIC5.39□□□□□ -1.55
MMP3P08254 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC5.39□□□□□ -1.55
MMP3P08254 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.39□□□□□ -1.55
MMP3P08254 OR4G3P-201ENST00000633500 913 ntBASIC5.39□□□□□ -1.55
MMP3P08254 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC5.39□□□□□ -1.55
MMP3P08254 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
MMP3P08254 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
MMP3P08254 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.39□□□□□ -1.55
MMP3P08254 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.39□□□□□ -1.55
MMP3P08254 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
MMP3P08254 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
MMP3P08254 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.39□□□□□ -1.55
MMP3P08254 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.39□□□□□ -1.55
MMP3P08254 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
MMP3P08254 TCP1P3-201ENST00000414406 1498 ntBASIC5.39□□□□□ -1.55
MMP3P08254 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.39□□□□□ -1.55
MMP3P08254 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
MMP3P08254 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
MMP3P08254 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.38□□□□□ -1.55
MMP3P08254 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
MMP3P08254 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.38□□□□□ -1.55
MMP3P08254 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
MMP3P08254 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.38□□□□□ -1.55
MMP3P08254 LINC00993-201ENST00000420453 540 ntBASIC5.38□□□□□ -1.55
MMP3P08254 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.38□□□□□ -1.55
MMP3P08254 RPL23AP1-201ENST00000428990 471 ntBASIC5.38□□□□□ -1.55
MMP3P08254 CCNB1IP1P2-201ENST00000432876 818 ntBASIC5.38□□□□□ -1.55
MMP3P08254 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
MMP3P08254 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
MMP3P08254 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
MMP3P08254 AL627224.1-201ENST00000448334 444 ntBASIC5.38□□□□□ -1.55
MMP3P08254 PRPF38AP1-201ENST00000451976 933 ntBASIC5.38□□□□□ -1.55
MMP3P08254 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC5.38□□□□□ -1.55
MMP3P08254 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC5.38□□□□□ -1.55
MMP3P08254 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC5.38□□□□□ -1.55
MMP3P08254 AC073358.1-201ENST00000505671 684 ntBASIC5.38□□□□□ -1.55
MMP3P08254 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
MMP3P08254 AC091868.1-201ENST00000508746 304 ntBASIC5.38□□□□□ -1.55
MMP3P08254 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC5.38□□□□□ -1.55
MMP3P08254 IGKV2D-10-201ENST00000520194 281 ntBASIC5.38□□□□□ -1.55
MMP3P08254 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.38□□□□□ -1.55
MMP3P08254 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.38□□□□□ -1.55
MMP3P08254 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC5.38□□□□□ -1.55
MMP3P08254 AL121594.4-201ENST00000556211 1196 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms