Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 RAD23BP1-201ENST00000421404 1227 ntBASIC6.49□□□□□ -1.37
PDGFAP04085 AL139184.1-202ENST00000422303 222 ntBASIC6.49□□□□□ -1.37
PDGFAP04085 FABP7P1-201ENST00000424004 391 ntBASIC6.49□□□□□ -1.37
PDGFAP04085 AC000089.1-201ENST00000424559 801 ntBASIC6.49□□□□□ -1.37
PDGFAP04085 AHCYP8-201ENST00000425108 209 ntBASIC6.49□□□□□ -1.37
PDGFAP04085 AL445669.1-201ENST00000426743 755 ntBASIC6.49□□□□□ -1.37
PDGFAP04085 NPM1P24-201ENST00000428039 894 ntBASIC6.49□□□□□ -1.37
PDGFAP04085 AC007365.2-201ENST00000428806 458 ntBASIC6.49□□□□□ -1.37
PDGFAP04085 MTCO3P21-201ENST00000430791 643 ntBASIC6.49□□□□□ -1.37
PDGFAP04085 MRPS21P3-201ENST00000436696 262 ntBASIC6.49□□□□□ -1.37
PDGFAP04085 HMGB3P12-201ENST00000438745 556 ntBASIC6.49□□□□□ -1.37
PDGFAP04085 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC6.49□□□□□ -1.37
PDGFAP04085 DEFA11P-201ENST00000446470 261 ntBASIC6.49□□□□□ -1.37
PDGFAP04085 RPL7AP71-201ENST00000451120 739 ntBASIC6.49□□□□□ -1.37
PDGFAP04085 RPL7AP52-201ENST00000458096 790 ntBASIC6.49□□□□□ -1.37
PDGFAP04085 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC6.49□□□□□ -1.37
PDGFAP04085 SNORA81.1-201ENST00000458922 177 ntBASIC6.49□□□□□ -1.37
PDGFAP04085 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.49□□□□□ -1.37
PDGFAP04085 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC6.49□□□□□ -1.37
PDGFAP04085 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC6.49□□□□□ -1.37
PDGFAP04085 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC6.49□□□□□ -1.37
PDGFAP04085 AC034159.1-201ENST00000513885 583 ntBASIC6.49□□□□□ -1.37
PDGFAP04085 AC093878.1-201ENST00000515630 432 ntBASIC6.49□□□□□ -1.37
PDGFAP04085 SCARNA15.1-201ENST00000516384 125 ntBASIC6.49□□□□□ -1.37
PDGFAP04085 IGKV2D-38-201ENST00000518423 240 ntBASIC6.49□□□□□ -1.37
PDGFAP04085 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC6.49□□□□□ -1.37
PDGFAP04085 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC6.49□□□□□ -1.37
PDGFAP04085 HSPA8P13-201ENST00000523715 472 ntBASIC6.49□□□□□ -1.37
PDGFAP04085 AC022832.1-201ENST00000530718 645 ntBASIC6.49□□□□□ -1.37
PDGFAP04085 OR52K3P-201ENST00000531655 943 ntBASIC6.49□□□□□ -1.37
PDGFAP04085 AP002373.2-201ENST00000541631 1060 ntBASIC6.49□□□□□ -1.37
PDGFAP04085 ARL2BPP2-201ENST00000550907 489 ntBASIC6.49□□□□□ -1.37
PDGFAP04085 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC6.49□□□□□ -1.37
PDGFAP04085 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC6.49□□□□□ -1.37
PDGFAP04085 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC6.49□□□□□ -1.37
PDGFAP04085 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC6.49□□□□□ -1.37
PDGFAP04085 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.49□□□□□ -1.37
PDGFAP04085 AL035413.2-201ENST00000604801 525 ntBASIC6.49□□□□□ -1.37
PDGFAP04085 AL352984.2-201ENST00000611153 546 ntBASIC6.49□□□□□ -1.37
PDGFAP04085 MIR7109-201ENST00000613748 65 ntBASIC6.49□□□□□ -1.37
PDGFAP04085 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC6.49□□□□□ -1.37
PDGFAP04085 AP006248.2-201ENST00000623309 592 ntBASIC6.49□□□□□ -1.37
PDGFAP04085 AL355480.1-201ENST00000629041 99 ntBASIC6.49□□□□□ -1.37
PDGFAP04085 AC027559.1-201ENST00000636288 271 ntBASIC6.49□□□□□ -1.37
PDGFAP04085 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC6.49□□□□□ -1.37
PDGFAP04085 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
PDGFAP04085 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.49□□□□□ -1.37
PDGFAP04085 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.49□□□□□ -1.37
PDGFAP04085 AP003486.1-201ENST00000525716 3994 ntBASIC6.49□□□□□ -1.37
PDGFAP04085 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
PDGFAP04085 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.49□□□□□ -1.37
PDGFAP04085 AL161901.1-201ENST00000624954 3425 ntBASIC6.49□□□□□ -1.37
PDGFAP04085 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PDGFAP04085 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC6.49□□□□□ -1.37
PDGFAP04085 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PDGFAP04085 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
PDGFAP04085 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC6.49□□□□□ -1.37
PDGFAP04085 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PDGFAP04085 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PDGFAP04085 AC025574.1-201ENST00000554784 1653 ntBASIC6.49□□□□□ -1.37
PDGFAP04085 AC096992.2-201ENST00000609553 1684 ntBASIC6.49□□□□□ -1.37
PDGFAP04085 AL355377.1-201ENST00000621125 1653 ntBASIC6.49□□□□□ -1.37
PDGFAP04085 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PDGFAP04085 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
PDGFAP04085 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PDGFAP04085 CA10-204ENST00000570565 2276 ntTSL 5 BASIC6.48□□□□□ -1.37
PDGFAP04085 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
PDGFAP04085 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
PDGFAP04085 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PDGFAP04085 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PDGFAP04085 USP9YP4-201ENST00000424401 1745 ntBASIC6.48□□□□□ -1.37
PDGFAP04085 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC6.48□□□□□ -1.37
PDGFAP04085 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
PDGFAP04085 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC6.48□□□□□ -1.37
PDGFAP04085 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PDGFAP04085 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.48□□□□□ -1.37
PDGFAP04085 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC6.48□□□□□ -1.37
PDGFAP04085 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
PDGFAP04085 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PDGFAP04085 Y_RNA.72-201ENST00000362894 103 ntBASIC6.48□□□□□ -1.37
PDGFAP04085 RNU6-1322P-201ENST00000364309 107 ntBASIC6.48□□□□□ -1.37
PDGFAP04085 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PDGFAP04085 Y_RNA.529-201ENST00000384586 119 ntBASIC6.48□□□□□ -1.37
PDGFAP04085 RNU6-1055P-201ENST00000391085 107 ntBASIC6.48□□□□□ -1.37
PDGFAP04085 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PDGFAP04085 RNA5SP118-201ENST00000410385 109 ntBASIC6.48□□□□□ -1.37
PDGFAP04085 AL773545.3-201ENST00000414297 706 ntBASIC6.48□□□□□ -1.37
PDGFAP04085 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.48□□□□□ -1.37
PDGFAP04085 MTND3P17-201ENST00000416968 344 ntBASIC6.48□□□□□ -1.37
PDGFAP04085 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC6.48□□□□□ -1.37
PDGFAP04085 AL035410.1-201ENST00000427409 427 ntBASIC6.48□□□□□ -1.37
PDGFAP04085 AC018804.1-201ENST00000430381 618 ntBASIC6.48□□□□□ -1.37
PDGFAP04085 GAPDHP19-201ENST00000431768 1005 ntBASIC6.48□□□□□ -1.37
PDGFAP04085 RPS3AP54-201ENST00000435535 734 ntBASIC6.48□□□□□ -1.37
PDGFAP04085 AC104698.1-201ENST00000435671 276 ntBASIC6.48□□□□□ -1.37
PDGFAP04085 AC128677.1-201ENST00000436016 442 ntBASIC6.48□□□□□ -1.37
PDGFAP04085 RSU1P2-202ENST00000437884 485 ntBASIC6.48□□□□□ -1.37
PDGFAP04085 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC6.48□□□□□ -1.37
PDGFAP04085 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC6.48□□□□□ -1.37
PDGFAP04085 EEF1B2P3-201ENST00000447718 678 ntBASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms