Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 COX5BP7-201ENST00000414780 274 ntBASIC7.81□□□□□ -1.16
CUX2O14529 OR4K6P-201ENST00000416478 897 ntBASIC7.81□□□□□ -1.16
CUX2O14529 AP000907.1-201ENST00000428428 510 ntBASIC7.81□□□□□ -1.16
CUX2O14529 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC7.81□□□□□ -1.16
CUX2O14529 RAB9AP1-201ENST00000449393 573 ntBASIC7.81□□□□□ -1.16
CUX2O14529 DHFRP3-201ENST00000455595 559 ntBASIC7.81□□□□□ -1.16
CUX2O14529 AC053481.1-201ENST00000467217 306 ntBASIC7.81□□□□□ -1.16
CUX2O14529 AC008958.1-201ENST00000511047 682 ntBASIC7.81□□□□□ -1.16
CUX2O14529 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CUX2O14529 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC7.81□□□□□ -1.16
CUX2O14529 MIR5685-201ENST00000579080 79 ntBASIC7.81□□□□□ -1.16
CUX2O14529 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC7.81□□□□□ -1.16
CUX2O14529 AL450472.3-201ENST00000615578 367 ntBASIC7.81□□□□□ -1.16
CUX2O14529 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC7.81□□□□□ -1.16
CUX2O14529 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
CUX2O14529 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CUX2O14529 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC7.81□□□□□ -1.16
CUX2O14529 AC109446.4-201ENST00000623235 2755 ntBASIC7.81□□□□□ -1.16
CUX2O14529 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC7.81□□□□□ -1.16
CUX2O14529 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
CUX2O14529 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC7.81□□□□□ -1.16
CUX2O14529 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
CUX2O14529 MIR133A2-201ENST00000347538 102 ntBASIC7.81□□□□□ -1.16
CUX2O14529 CCL7-202ENST00000394627 696 ntTSL 3 BASIC7.81□□□□□ -1.16
CUX2O14529 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC7.81□□□□□ -1.16
CUX2O14529 OR52E3P-201ENST00000452083 936 ntBASIC7.81□□□□□ -1.16
CUX2O14529 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC7.81□□□□□ -1.16
CUX2O14529 RPL5P12-201ENST00000477071 851 ntBASIC7.81□□□□□ -1.16
CUX2O14529 Y_RNA.719-201ENST00000517156 106 ntBASIC7.81□□□□□ -1.16
CUX2O14529 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC7.81□□□□□ -1.16
CUX2O14529 HSPE1P5-201ENST00000561489 272 ntBASIC7.81□□□□□ -1.16
CUX2O14529 HYKK-203ENST00000563233 734 ntTSL 2 BASIC7.81□□□□□ -1.16
CUX2O14529 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC7.81□□□□□ -1.16
CUX2O14529 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC7.81□□□□□ -1.16
CUX2O14529 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CUX2O14529 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC7.8□□□□□ -1.16
CUX2O14529 AC009229.4-201ENST00000623854 1947 ntBASIC7.8□□□□□ -1.16
CUX2O14529 AC011447.7-201ENST00000624228 1590 ntBASIC7.8□□□□□ -1.16
CUX2O14529 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CUX2O14529 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC7.8□□□□□ -1.16
CUX2O14529 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CUX2O14529 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC7.8□□□□□ -1.16
CUX2O14529 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CUX2O14529 RNU1-83P-201ENST00000363426 164 ntBASIC7.8□□□□□ -1.16
CUX2O14529 RNA5SP130-201ENST00000364431 114 ntBASIC7.8□□□□□ -1.16
CUX2O14529 AL390879.2-203ENST00000426943 1121 ntBASIC7.8□□□□□ -1.16
CUX2O14529 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC7.8□□□□□ -1.16
CUX2O14529 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC7.8□□□□□ -1.16
CUX2O14529 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CUX2O14529 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CUX2O14529 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CUX2O14529 LINC00561-201ENST00000565815 2738 ntBASIC7.79□□□□□ -1.16
CUX2O14529 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
CUX2O14529 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CUX2O14529 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
CUX2O14529 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CUX2O14529 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC7.79□□□□□ -1.16
CUX2O14529 AL121950.1-201ENST00000624993 2077 ntBASIC7.79□□□□□ -1.16
CUX2O14529 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
CUX2O14529 AC008033.1-201ENST00000216407 1162 ntBASIC7.79□□□□□ -1.16
CUX2O14529 ARL4AP5-201ENST00000404372 599 ntBASIC7.79□□□□□ -1.16
CUX2O14529 AL603766.1-201ENST00000407763 664 ntBASIC7.79□□□□□ -1.16
CUX2O14529 AL035696.2-201ENST00000407941 709 ntBASIC7.79□□□□□ -1.16
CUX2O14529 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC7.79□□□□□ -1.16
CUX2O14529 RPS27AP1-201ENST00000475545 471 ntBASIC7.79□□□□□ -1.16
CUX2O14529 F11-205ENST00000492972 1204 ntTSL 2 BASIC7.79□□□□□ -1.16
CUX2O14529 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC7.79□□□□□ -1.16
CUX2O14529 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC7.79□□□□□ -1.16
CUX2O14529 AC027216.1-201ENST00000577726 685 ntBASIC7.79□□□□□ -1.16
CUX2O14529 MIR4660-201ENST00000583549 74 ntBASIC7.79□□□□□ -1.16
CUX2O14529 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC7.79□□□□□ -1.16
CUX2O14529 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC7.79□□□□□ -1.16
CUX2O14529 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC7.79□□□□□ -1.16
CUX2O14529 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CUX2O14529 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CUX2O14529 ICE2P1-201ENST00000512800 1849 ntBASIC7.78□□□□□ -1.16
CUX2O14529 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CUX2O14529 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
CUX2O14529 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC7.78□□□□□ -1.16
CUX2O14529 VN1R37P-201ENST00000419096 748 ntBASIC7.78□□□□□ -1.16
CUX2O14529 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC7.78□□□□□ -1.16
CUX2O14529 AC105233.3-201ENST00000531125 744 ntBASIC7.78□□□□□ -1.16
CUX2O14529 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC7.78□□□□□ -1.16
CUX2O14529 AP005205.1-201ENST00000563503 508 ntBASIC7.78□□□□□ -1.16
CUX2O14529 AC090286.3-201ENST00000573133 187 ntBASIC7.78□□□□□ -1.16
CUX2O14529 AC107982.3-201ENST00000584957 985 ntBASIC7.78□□□□□ -1.16
CUX2O14529 AC073137.1-201ENST00000605636 634 ntBASIC7.78□□□□□ -1.16
CUX2O14529 AC116312.1-201ENST00000606841 314 ntBASIC7.78□□□□□ -1.16
CUX2O14529 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CUX2O14529 BCORP1-203ENST00000513194 5093 ntBASIC7.78□□□□□ -1.16
CUX2O14529 AC004817.4-201ENST00000602396 3625 ntBASIC7.78□□□□□ -1.16
CUX2O14529 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
CUX2O14529 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.16
CUX2O14529 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
CUX2O14529 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.16
CUX2O14529 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CUX2O14529 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC7.77□□□□□ -1.17
CUX2O14529 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CUX2O14529 RNA5SP72-201ENST00000364442 117 ntBASIC7.77□□□□□ -1.17
CUX2O14529 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms