Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
DNMT3AQ9Y6K1 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
DNMT3AQ9Y6K1 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
DNMT3AQ9Y6K1 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.09■□□□□ 0.65
DNMT3AQ9Y6K1 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
DNMT3AQ9Y6K1 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
DNMT3AQ9Y6K1 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
DNMT3AQ9Y6K1 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
DNMT3AQ9Y6K1 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
DNMT3AQ9Y6K1 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.09■□□□□ 0.65
DNMT3AQ9Y6K1 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
DNMT3AQ9Y6K1 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
DNMT3AQ9Y6K1 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
DNMT3AQ9Y6K1 CR392000.1-201ENST00000624770 1228 ntBASIC19.09■□□□□ 0.65
DNMT3AQ9Y6K1 AL031985.4-201ENST00000642138 673 ntBASIC19.09■□□□□ 0.65
DNMT3AQ9Y6K1 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
DNMT3AQ9Y6K1 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
DNMT3AQ9Y6K1 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
DNMT3AQ9Y6K1 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
DNMT3AQ9Y6K1 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
DNMT3AQ9Y6K1 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
DNMT3AQ9Y6K1 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
DNMT3AQ9Y6K1 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.08■□□□□ 0.65
DNMT3AQ9Y6K1 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.08■□□□□ 0.65
DNMT3AQ9Y6K1 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
DNMT3AQ9Y6K1 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
DNMT3AQ9Y6K1 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.08■□□□□ 0.65
DNMT3AQ9Y6K1 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
DNMT3AQ9Y6K1 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
DNMT3AQ9Y6K1 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
DNMT3AQ9Y6K1 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
DNMT3AQ9Y6K1 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
DNMT3AQ9Y6K1 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
DNMT3AQ9Y6K1 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
DNMT3AQ9Y6K1 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
DNMT3AQ9Y6K1 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
DNMT3AQ9Y6K1 FAM197Y1-201ENST00000421178 764 ntBASIC19.08■□□□□ 0.64
DNMT3AQ9Y6K1 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
DNMT3AQ9Y6K1 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.08■□□□□ 0.64
DNMT3AQ9Y6K1 AC026271.3-201ENST00000571884 352 ntBASIC19.08■□□□□ 0.64
DNMT3AQ9Y6K1 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.08■□□□□ 0.64
DNMT3AQ9Y6K1 MIR4785-201ENST00000585005 73 ntBASIC19.08■□□□□ 0.64
DNMT3AQ9Y6K1 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
DNMT3AQ9Y6K1 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.08■□□□□ 0.64
DNMT3AQ9Y6K1 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.08■□□□□ 0.64
DNMT3AQ9Y6K1 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
DNMT3AQ9Y6K1 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.08■□□□□ 0.64
DNMT3AQ9Y6K1 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
DNMT3AQ9Y6K1 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
DNMT3AQ9Y6K1 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
DNMT3AQ9Y6K1 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.07■□□□□ 0.64
DNMT3AQ9Y6K1 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
DNMT3AQ9Y6K1 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
DNMT3AQ9Y6K1 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.07■□□□□ 0.64
DNMT3AQ9Y6K1 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
DNMT3AQ9Y6K1 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
DNMT3AQ9Y6K1 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
DNMT3AQ9Y6K1 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
DNMT3AQ9Y6K1 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
DNMT3AQ9Y6K1 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
DNMT3AQ9Y6K1 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
DNMT3AQ9Y6K1 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.07■□□□□ 0.64
DNMT3AQ9Y6K1 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
DNMT3AQ9Y6K1 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.07■□□□□ 0.64
DNMT3AQ9Y6K1 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
DNMT3AQ9Y6K1 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.07■□□□□ 0.64
DNMT3AQ9Y6K1 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
DNMT3AQ9Y6K1 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
DNMT3AQ9Y6K1 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
DNMT3AQ9Y6K1 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
DNMT3AQ9Y6K1 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
DNMT3AQ9Y6K1 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DNMT3AQ9Y6K1 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
DNMT3AQ9Y6K1 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DNMT3AQ9Y6K1 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.06■□□□□ 0.64
DNMT3AQ9Y6K1 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
DNMT3AQ9Y6K1 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.06■□□□□ 0.64
DNMT3AQ9Y6K1 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DNMT3AQ9Y6K1 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DNMT3AQ9Y6K1 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.06■□□□□ 0.64
DNMT3AQ9Y6K1 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
DNMT3AQ9Y6K1 AL596275.1-201ENST00000423464 877 ntBASIC19.06■□□□□ 0.64
DNMT3AQ9Y6K1 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.06■□□□□ 0.64
DNMT3AQ9Y6K1 AL355355.2-201ENST00000442321 338 ntBASIC19.06■□□□□ 0.64
DNMT3AQ9Y6K1 SNORA78-201ENST00000459373 127 ntBASIC19.06■□□□□ 0.64
DNMT3AQ9Y6K1 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.06■□□□□ 0.64
DNMT3AQ9Y6K1 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
DNMT3AQ9Y6K1 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.06■□□□□ 0.64
DNMT3AQ9Y6K1 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.06■□□□□ 0.64
DNMT3AQ9Y6K1 AL160286.2-201ENST00000567150 934 ntBASIC19.06■□□□□ 0.64
DNMT3AQ9Y6K1 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.06■□□□□ 0.64
DNMT3AQ9Y6K1 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.06■□□□□ 0.64
DNMT3AQ9Y6K1 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.06■□□□□ 0.64
DNMT3AQ9Y6K1 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.06■□□□□ 0.64
DNMT3AQ9Y6K1 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
DNMT3AQ9Y6K1 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DNMT3AQ9Y6K1 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
DNMT3AQ9Y6K1 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DNMT3AQ9Y6K1 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
DNMT3AQ9Y6K1 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms