Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN16Q9Y5I7 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN16Q9Y5I7 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CLDN16Q9Y5I7 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN16Q9Y5I7 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN16Q9Y5I7 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CLDN16Q9Y5I7 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.15■□□□□ 0.5
CLDN16Q9Y5I7 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.15■□□□□ 0.5
CLDN16Q9Y5I7 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.15■□□□□ 0.5
CLDN16Q9Y5I7 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.15■□□□□ 0.5
CLDN16Q9Y5I7 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.15■□□□□ 0.5
CLDN16Q9Y5I7 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN16Q9Y5I7 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN16Q9Y5I7 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.15■□□□□ 0.5
CLDN16Q9Y5I7 Z82202.1-201ENST00000623446 1880 ntBASIC18.15■□□□□ 0.5
CLDN16Q9Y5I7 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN16Q9Y5I7 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.15■□□□□ 0.5
CLDN16Q9Y5I7 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN16Q9Y5I7 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN16Q9Y5I7 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN16Q9Y5I7 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CLDN16Q9Y5I7 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN16Q9Y5I7 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.14■□□□□ 0.49
CLDN16Q9Y5I7 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN16Q9Y5I7 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN16Q9Y5I7 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CLDN16Q9Y5I7 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.14■□□□□ 0.49
CLDN16Q9Y5I7 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN16Q9Y5I7 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
CLDN16Q9Y5I7 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN16Q9Y5I7 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.14■□□□□ 0.49
CLDN16Q9Y5I7 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.14■□□□□ 0.49
CLDN16Q9Y5I7 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.14■□□□□ 0.49
CLDN16Q9Y5I7 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.14■□□□□ 0.49
CLDN16Q9Y5I7 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN16Q9Y5I7 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.14■□□□□ 0.49
CLDN16Q9Y5I7 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.14■□□□□ 0.49
CLDN16Q9Y5I7 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN16Q9Y5I7 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN16Q9Y5I7 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.13■□□□□ 0.49
CLDN16Q9Y5I7 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN16Q9Y5I7 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.13■□□□□ 0.49
CLDN16Q9Y5I7 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN16Q9Y5I7 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.13■□□□□ 0.49
CLDN16Q9Y5I7 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
CLDN16Q9Y5I7 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN16Q9Y5I7 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN16Q9Y5I7 AC116562.2-201ENST00000507042 360 ntBASIC18.13■□□□□ 0.49
CLDN16Q9Y5I7 NUDT16P1-203ENST00000513809 620 ntBASIC18.13■□□□□ 0.49
CLDN16Q9Y5I7 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.13■□□□□ 0.49
CLDN16Q9Y5I7 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN16Q9Y5I7 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CLDN16Q9Y5I7 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC18.13■□□□□ 0.49
CLDN16Q9Y5I7 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.13■□□□□ 0.49
CLDN16Q9Y5I7 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.12■□□□□ 0.49
CLDN16Q9Y5I7 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.12■□□□□ 0.49
CLDN16Q9Y5I7 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CLDN16Q9Y5I7 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.12■□□□□ 0.49
CLDN16Q9Y5I7 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CLDN16Q9Y5I7 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN16Q9Y5I7 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.12■□□□□ 0.49
CLDN16Q9Y5I7 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.12■□□□□ 0.49
CLDN16Q9Y5I7 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CLDN16Q9Y5I7 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.12■□□□□ 0.49
CLDN16Q9Y5I7 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
CLDN16Q9Y5I7 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.12■□□□□ 0.49
CLDN16Q9Y5I7 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.12■□□□□ 0.49
CLDN16Q9Y5I7 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.12■□□□□ 0.49
CLDN16Q9Y5I7 TSPY15P-201ENST00000457163 923 ntBASIC18.12■□□□□ 0.49
CLDN16Q9Y5I7 AC011506.1-201ENST00000474329 610 ntBASIC18.12■□□□□ 0.49
CLDN16Q9Y5I7 AL160286.2-201ENST00000567150 934 ntBASIC18.12■□□□□ 0.49
CLDN16Q9Y5I7 AC026271.3-201ENST00000571884 352 ntBASIC18.12■□□□□ 0.49
CLDN16Q9Y5I7 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.12■□□□□ 0.49
CLDN16Q9Y5I7 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.12■□□□□ 0.49
CLDN16Q9Y5I7 AC026471.5-201ENST00000615068 467 ntBASIC18.12■□□□□ 0.49
CLDN16Q9Y5I7 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CLDN16Q9Y5I7 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN16Q9Y5I7 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN16Q9Y5I7 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN16Q9Y5I7 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CLDN16Q9Y5I7 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN16Q9Y5I7 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN16Q9Y5I7 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.11■□□□□ 0.49
CLDN16Q9Y5I7 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN16Q9Y5I7 SDHAP1-207ENST00000440850 2000 ntBASIC18.11■□□□□ 0.49
CLDN16Q9Y5I7 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN16Q9Y5I7 SLC25A24-204ENST00000569674 2357 ntBASIC18.11■□□□□ 0.49
CLDN16Q9Y5I7 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CLDN16Q9Y5I7 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN16Q9Y5I7 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN16Q9Y5I7 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN16Q9Y5I7 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CLDN16Q9Y5I7 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.11■□□□□ 0.49
CLDN16Q9Y5I7 AC008040.2-201ENST00000461049 708 ntBASIC18.11■□□□□ 0.49
CLDN16Q9Y5I7 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.11■□□□□ 0.49
CLDN16Q9Y5I7 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.11■□□□□ 0.49
CLDN16Q9Y5I7 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.11■□□□□ 0.49
CLDN16Q9Y5I7 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.11■□□□□ 0.49
CLDN16Q9Y5I7 REXO1L10P-201ENST00000615707 1290 ntBASIC18.11■□□□□ 0.49
CLDN16Q9Y5I7 REXO1L12P-201ENST00000622156 912 ntBASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms