Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA6Q9Y5G7 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.75■□□□□ 0.59
PCDHGA6Q9Y5G7 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
PCDHGA6Q9Y5G7 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDHGA6Q9Y5G7 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
PCDHGA6Q9Y5G7 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA6Q9Y5G7 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA6Q9Y5G7 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA6Q9Y5G7 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA6Q9Y5G7 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA6Q9Y5G7 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA6Q9Y5G7 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
PCDHGA6Q9Y5G7 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA6Q9Y5G7 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA6Q9Y5G7 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDHGA6Q9Y5G7 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDHGA6Q9Y5G7 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDHGA6Q9Y5G7 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.75■□□□□ 0.59
PCDHGA6Q9Y5G7 AL353708.3-201ENST00000610272 989 ntBASIC18.75■□□□□ 0.59
PCDHGA6Q9Y5G7 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA6Q9Y5G7 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA6Q9Y5G7 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA6Q9Y5G7 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA6Q9Y5G7 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDHGA6Q9Y5G7 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDHGA6Q9Y5G7 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA6Q9Y5G7 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA6Q9Y5G7 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
PCDHGA6Q9Y5G7 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA6Q9Y5G7 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGA6Q9Y5G7 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
PCDHGA6Q9Y5G7 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGA6Q9Y5G7 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
PCDHGA6Q9Y5G7 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGA6Q9Y5G7 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGA6Q9Y5G7 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGA6Q9Y5G7 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
PCDHGA6Q9Y5G7 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.74■□□□□ 0.59
PCDHGA6Q9Y5G7 BX323043.1-201ENST00000641006 1765 ntBASIC18.74■□□□□ 0.59
PCDHGA6Q9Y5G7 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGA6Q9Y5G7 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGA6Q9Y5G7 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.74■□□□□ 0.59
PCDHGA6Q9Y5G7 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
PCDHGA6Q9Y5G7 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.74■□□□□ 0.59
PCDHGA6Q9Y5G7 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.74■□□□□ 0.59
PCDHGA6Q9Y5G7 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHGA6Q9Y5G7 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
PCDHGA6Q9Y5G7 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGA6Q9Y5G7 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
PCDHGA6Q9Y5G7 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHGA6Q9Y5G7 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGA6Q9Y5G7 AC125437.2-201ENST00000625180 2167 ntBASIC18.74■□□□□ 0.59
PCDHGA6Q9Y5G7 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGA6Q9Y5G7 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGA6Q9Y5G7 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGA6Q9Y5G7 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.73■□□□□ 0.59
PCDHGA6Q9Y5G7 KRT18P21-201ENST00000515767 1272 ntBASIC18.73■□□□□ 0.59
PCDHGA6Q9Y5G7 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
PCDHGA6Q9Y5G7 AC010331.1-201ENST00000611423 582 ntBASIC18.73■□□□□ 0.59
PCDHGA6Q9Y5G7 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.73■□□□□ 0.59
PCDHGA6Q9Y5G7 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGA6Q9Y5G7 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
PCDHGA6Q9Y5G7 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
PCDHGA6Q9Y5G7 PTBP1P-201ENST00000554374 1601 ntBASIC18.73■□□□□ 0.59
PCDHGA6Q9Y5G7 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
PCDHGA6Q9Y5G7 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGA6Q9Y5G7 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGA6Q9Y5G7 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGA6Q9Y5G7 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGA6Q9Y5G7 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGA6Q9Y5G7 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
PCDHGA6Q9Y5G7 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.72■□□□□ 0.59
PCDHGA6Q9Y5G7 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDHGA6Q9Y5G7 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.72■□□□□ 0.59
PCDHGA6Q9Y5G7 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
PCDHGA6Q9Y5G7 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGA6Q9Y5G7 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGA6Q9Y5G7 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDHGA6Q9Y5G7 AC098818.2-201ENST00000564925 2320 ntBASIC18.72■□□□□ 0.59
PCDHGA6Q9Y5G7 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGA6Q9Y5G7 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDHGA6Q9Y5G7 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDHGA6Q9Y5G7 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDHGA6Q9Y5G7 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGA6Q9Y5G7 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.72■□□□□ 0.59
PCDHGA6Q9Y5G7 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.72■□□□□ 0.59
PCDHGA6Q9Y5G7 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDHGA6Q9Y5G7 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDHGA6Q9Y5G7 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGA6Q9Y5G7 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGA6Q9Y5G7 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PCDHGA6Q9Y5G7 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGA6Q9Y5G7 AC092720.2-201ENST00000602388 1665 ntBASIC18.72■□□□□ 0.59
PCDHGA6Q9Y5G7 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGA6Q9Y5G7 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGA6Q9Y5G7 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGA6Q9Y5G7 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGA6Q9Y5G7 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDHGA6Q9Y5G7 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGA6Q9Y5G7 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms