Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LSM4Q9Y4Z0 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LSM4Q9Y4Z0 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
LSM4Q9Y4Z0 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
LSM4Q9Y4Z0 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LSM4Q9Y4Z0 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LSM4Q9Y4Z0 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LSM4Q9Y4Z0 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
LSM4Q9Y4Z0 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC15.56■□□□□ 0.08
LSM4Q9Y4Z0 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LSM4Q9Y4Z0 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LSM4Q9Y4Z0 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LSM4Q9Y4Z0 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
LSM4Q9Y4Z0 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC15.56■□□□□ 0.08
LSM4Q9Y4Z0 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC15.56■□□□□ 0.08
LSM4Q9Y4Z0 CASP6-205ENST00000505486 538 ntTSL 4 BASIC15.56■□□□□ 0.08
LSM4Q9Y4Z0 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC15.56■□□□□ 0.08
LSM4Q9Y4Z0 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LSM4Q9Y4Z0 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LSM4Q9Y4Z0 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LSM4Q9Y4Z0 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LSM4Q9Y4Z0 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC15.56■□□□□ 0.08
LSM4Q9Y4Z0 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LSM4Q9Y4Z0 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LSM4Q9Y4Z0 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LSM4Q9Y4Z0 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LSM4Q9Y4Z0 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LSM4Q9Y4Z0 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
LSM4Q9Y4Z0 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LSM4Q9Y4Z0 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LSM4Q9Y4Z0 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LSM4Q9Y4Z0 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LSM4Q9Y4Z0 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC15.55■□□□□ 0.08
LSM4Q9Y4Z0 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LSM4Q9Y4Z0 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LSM4Q9Y4Z0 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC15.55■□□□□ 0.08
LSM4Q9Y4Z0 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
LSM4Q9Y4Z0 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC15.55■□□□□ 0.08
LSM4Q9Y4Z0 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LSM4Q9Y4Z0 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LSM4Q9Y4Z0 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
LSM4Q9Y4Z0 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC15.55■□□□□ 0.08
LSM4Q9Y4Z0 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC15.55■□□□□ 0.08
LSM4Q9Y4Z0 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LSM4Q9Y4Z0 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC15.55■□□□□ 0.08
LSM4Q9Y4Z0 BAALC-201ENST00000297574 801 ntTSL 3 BASIC15.55■□□□□ 0.08
LSM4Q9Y4Z0 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC15.55■□□□□ 0.08
LSM4Q9Y4Z0 AL158047.1-201ENST00000445918 881 ntBASIC15.55■□□□□ 0.08
LSM4Q9Y4Z0 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC15.55■□□□□ 0.08
LSM4Q9Y4Z0 UNC93B5-201ENST00000530315 699 ntBASIC15.55■□□□□ 0.08
LSM4Q9Y4Z0 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC15.55■□□□□ 0.08
LSM4Q9Y4Z0 AL031963.3-201ENST00000606441 850 ntBASIC15.55■□□□□ 0.08
LSM4Q9Y4Z0 MMD2-204ENST00000612910 778 ntTSL 5 BASIC15.55■□□□□ 0.08
LSM4Q9Y4Z0 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LSM4Q9Y4Z0 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LSM4Q9Y4Z0 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LSM4Q9Y4Z0 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LSM4Q9Y4Z0 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
LSM4Q9Y4Z0 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
LSM4Q9Y4Z0 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC15.54■□□□□ 0.08
LSM4Q9Y4Z0 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LSM4Q9Y4Z0 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LSM4Q9Y4Z0 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LSM4Q9Y4Z0 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LSM4Q9Y4Z0 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LSM4Q9Y4Z0 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC15.54■□□□□ 0.08
LSM4Q9Y4Z0 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
LSM4Q9Y4Z0 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC15.54■□□□□ 0.08
LSM4Q9Y4Z0 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC15.54■□□□□ 0.08
LSM4Q9Y4Z0 OR2A1-AS1-201ENST00000462305 773 ntBASIC15.54■□□□□ 0.08
LSM4Q9Y4Z0 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC15.54■□□□□ 0.08
LSM4Q9Y4Z0 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LSM4Q9Y4Z0 AC026366.1-201ENST00000488803 879 ntBASIC15.54■□□□□ 0.08
LSM4Q9Y4Z0 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC15.54■□□□□ 0.08
LSM4Q9Y4Z0 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC15.54■□□□□ 0.08
LSM4Q9Y4Z0 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
LSM4Q9Y4Z0 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
LSM4Q9Y4Z0 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LSM4Q9Y4Z0 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LSM4Q9Y4Z0 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC15.54■□□□□ 0.08
LSM4Q9Y4Z0 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC15.54■□□□□ 0.08
LSM4Q9Y4Z0 NEFHP1-201ENST00000412845 2629 ntBASIC15.54■□□□□ 0.08
LSM4Q9Y4Z0 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LSM4Q9Y4Z0 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
LSM4Q9Y4Z0 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LSM4Q9Y4Z0 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC15.53■□□□□ 0.08
LSM4Q9Y4Z0 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LSM4Q9Y4Z0 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LSM4Q9Y4Z0 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LSM4Q9Y4Z0 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC15.53■□□□□ 0.08
LSM4Q9Y4Z0 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LSM4Q9Y4Z0 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LSM4Q9Y4Z0 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LSM4Q9Y4Z0 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LSM4Q9Y4Z0 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC15.53■□□□□ 0.08
LSM4Q9Y4Z0 SERPINH1P1-201ENST00000419794 1249 ntBASIC15.53■□□□□ 0.08
LSM4Q9Y4Z0 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC15.53■□□□□ 0.08
LSM4Q9Y4Z0 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC15.53■□□□□ 0.08
LSM4Q9Y4Z0 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC15.53■□□□□ 0.08
LSM4Q9Y4Z0 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms