Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RHBDD3Q9Y3P4 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RHBDD3Q9Y3P4 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RHBDD3Q9Y3P4 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RHBDD3Q9Y3P4 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
RHBDD3Q9Y3P4 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.03■□□□□ 0.32
RHBDD3Q9Y3P4 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RHBDD3Q9Y3P4 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
RHBDD3Q9Y3P4 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.03■□□□□ 0.32
RHBDD3Q9Y3P4 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RHBDD3Q9Y3P4 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.03■□□□□ 0.32
RHBDD3Q9Y3P4 MIR4758-201ENST00000577688 71 ntBASIC17.03■□□□□ 0.32
RHBDD3Q9Y3P4 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RHBDD3Q9Y3P4 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RHBDD3Q9Y3P4 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RHBDD3Q9Y3P4 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RHBDD3Q9Y3P4 AC093503.3-201ENST00000624917 2352 ntBASIC17.03■□□□□ 0.32
RHBDD3Q9Y3P4 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
RHBDD3Q9Y3P4 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RHBDD3Q9Y3P4 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
RHBDD3Q9Y3P4 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RHBDD3Q9Y3P4 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
RHBDD3Q9Y3P4 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RHBDD3Q9Y3P4 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.03■□□□□ 0.32
RHBDD3Q9Y3P4 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
RHBDD3Q9Y3P4 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
RHBDD3Q9Y3P4 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RHBDD3Q9Y3P4 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RHBDD3Q9Y3P4 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RHBDD3Q9Y3P4 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RHBDD3Q9Y3P4 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RHBDD3Q9Y3P4 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RHBDD3Q9Y3P4 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
RHBDD3Q9Y3P4 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
RHBDD3Q9Y3P4 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.02■□□□□ 0.32
RHBDD3Q9Y3P4 AC090192.1-201ENST00000517740 490 ntBASIC17.02■□□□□ 0.32
RHBDD3Q9Y3P4 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.02■□□□□ 0.32
RHBDD3Q9Y3P4 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RHBDD3Q9Y3P4 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RHBDD3Q9Y3P4 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RHBDD3Q9Y3P4 PHGDH-210ENST00000641115 1638 ntBASIC17.02■□□□□ 0.31
RHBDD3Q9Y3P4 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
RHBDD3Q9Y3P4 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
RHBDD3Q9Y3P4 AL032819.2-201ENST00000624543 2162 ntBASIC17.02■□□□□ 0.31
RHBDD3Q9Y3P4 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.01■□□□□ 0.31
RHBDD3Q9Y3P4 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RHBDD3Q9Y3P4 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.01■□□□□ 0.31
RHBDD3Q9Y3P4 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RHBDD3Q9Y3P4 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RHBDD3Q9Y3P4 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RHBDD3Q9Y3P4 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
RHBDD3Q9Y3P4 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RHBDD3Q9Y3P4 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RHBDD3Q9Y3P4 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
RHBDD3Q9Y3P4 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
RHBDD3Q9Y3P4 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.01■□□□□ 0.31
RHBDD3Q9Y3P4 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RHBDD3Q9Y3P4 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RHBDD3Q9Y3P4 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.01■□□□□ 0.31
RHBDD3Q9Y3P4 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.01■□□□□ 0.31
RHBDD3Q9Y3P4 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.01■□□□□ 0.31
RHBDD3Q9Y3P4 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
RHBDD3Q9Y3P4 AL138781.1-201ENST00000566567 1274 ntBASIC17.01■□□□□ 0.31
RHBDD3Q9Y3P4 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.01■□□□□ 0.31
RHBDD3Q9Y3P4 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.01■□□□□ 0.31
RHBDD3Q9Y3P4 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.01■□□□□ 0.31
RHBDD3Q9Y3P4 AL109923.1-201ENST00000618799 583 ntBASIC17.01■□□□□ 0.31
RHBDD3Q9Y3P4 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RHBDD3Q9Y3P4 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RHBDD3Q9Y3P4 AP001271.2-201ENST00000624018 1556 ntBASIC17.01■□□□□ 0.31
RHBDD3Q9Y3P4 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RHBDD3Q9Y3P4 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RHBDD3Q9Y3P4 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
RHBDD3Q9Y3P4 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RHBDD3Q9Y3P4 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17■□□□□ 0.31
RHBDD3Q9Y3P4 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17■□□□□ 0.31
RHBDD3Q9Y3P4 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RHBDD3Q9Y3P4 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
RHBDD3Q9Y3P4 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RHBDD3Q9Y3P4 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
RHBDD3Q9Y3P4 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
RHBDD3Q9Y3P4 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17■□□□□ 0.31
RHBDD3Q9Y3P4 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RHBDD3Q9Y3P4 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RHBDD3Q9Y3P4 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
RHBDD3Q9Y3P4 AL390719.1-204ENST00000412397 1219 ntBASIC17■□□□□ 0.31
RHBDD3Q9Y3P4 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17■□□□□ 0.31
RHBDD3Q9Y3P4 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17■□□□□ 0.31
RHBDD3Q9Y3P4 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17■□□□□ 0.31
RHBDD3Q9Y3P4 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17■□□□□ 0.31
RHBDD3Q9Y3P4 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RHBDD3Q9Y3P4 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17■□□□□ 0.31
RHBDD3Q9Y3P4 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RHBDD3Q9Y3P4 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
RHBDD3Q9Y3P4 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17■□□□□ 0.31
RHBDD3Q9Y3P4 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17■□□□□ 0.31
RHBDD3Q9Y3P4 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17■□□□□ 0.31
RHBDD3Q9Y3P4 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RHBDD3Q9Y3P4 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC16.99■□□□□ 0.31
RHBDD3Q9Y3P4 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms