Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 AC011558.1-201ENST00000623459 338 ntBASIC25.47■■□□□ 1.67
SPG7Q9UQ90 KRT8P41-201ENST00000533985 1514 ntBASIC25.47■■□□□ 1.67
SPG7Q9UQ90 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SPG7Q9UQ90 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SPG7Q9UQ90 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC25.46■■□□□ 1.67
SPG7Q9UQ90 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC25.46■■□□□ 1.67
SPG7Q9UQ90 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC25.46■■□□□ 1.67
SPG7Q9UQ90 UPK3BP1-201ENST00000428678 509 ntBASIC25.46■■□□□ 1.67
SPG7Q9UQ90 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
SPG7Q9UQ90 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
SPG7Q9UQ90 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
SPG7Q9UQ90 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
SPG7Q9UQ90 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC25.46■■□□□ 1.67
SPG7Q9UQ90 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC25.46■■□□□ 1.67
SPG7Q9UQ90 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
SPG7Q9UQ90 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SPG7Q9UQ90 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC25.46■■□□□ 1.67
SPG7Q9UQ90 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC25.45■■□□□ 1.67
SPG7Q9UQ90 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
SPG7Q9UQ90 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC25.45■■□□□ 1.66
SPG7Q9UQ90 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.66
SPG7Q9UQ90 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SPG7Q9UQ90 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SPG7Q9UQ90 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC25.45■■□□□ 1.66
SPG7Q9UQ90 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC25.45■■□□□ 1.66
SPG7Q9UQ90 AL031432.5-201ENST00000641059 760 ntBASIC25.45■■□□□ 1.66
SPG7Q9UQ90 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC25.45■■□□□ 1.66
SPG7Q9UQ90 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC25.45■■□□□ 1.66
SPG7Q9UQ90 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC25.45■■□□□ 1.66
SPG7Q9UQ90 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.66
SPG7Q9UQ90 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SPG7Q9UQ90 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.66
SPG7Q9UQ90 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC25.45■■□□□ 1.66
SPG7Q9UQ90 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SPG7Q9UQ90 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC25.45■■□□□ 1.66
SPG7Q9UQ90 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC25.44■■□□□ 1.66
SPG7Q9UQ90 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SPG7Q9UQ90 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
SPG7Q9UQ90 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC25.44■■□□□ 1.66
SPG7Q9UQ90 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SPG7Q9UQ90 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC25.44■■□□□ 1.66
SPG7Q9UQ90 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC25.44■■□□□ 1.66
SPG7Q9UQ90 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC25.44■■□□□ 1.66
SPG7Q9UQ90 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC25.44■■□□□ 1.66
SPG7Q9UQ90 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC25.44■■□□□ 1.66
SPG7Q9UQ90 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SPG7Q9UQ90 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SPG7Q9UQ90 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC25.44■■□□□ 1.66
SPG7Q9UQ90 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SPG7Q9UQ90 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC25.44■■□□□ 1.66
SPG7Q9UQ90 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC25.44■■□□□ 1.66
SPG7Q9UQ90 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SPG7Q9UQ90 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
SPG7Q9UQ90 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC25.43■■□□□ 1.66
SPG7Q9UQ90 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC25.43■■□□□ 1.66
SPG7Q9UQ90 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC25.43■■□□□ 1.66
SPG7Q9UQ90 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC25.43■■□□□ 1.66
SPG7Q9UQ90 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SPG7Q9UQ90 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC25.43■■□□□ 1.66
SPG7Q9UQ90 ANKRD20A18P-201ENST00000359341 492 ntBASIC25.43■■□□□ 1.66
SPG7Q9UQ90 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SPG7Q9UQ90 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
SPG7Q9UQ90 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC25.43■■□□□ 1.66
SPG7Q9UQ90 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC25.43■■□□□ 1.66
SPG7Q9UQ90 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
SPG7Q9UQ90 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SPG7Q9UQ90 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
SPG7Q9UQ90 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC25.42■■□□□ 1.66
SPG7Q9UQ90 DET1-207ENST00000564406 2315 ntTSL 2 BASIC25.42■■□□□ 1.66
SPG7Q9UQ90 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC25.42■■□□□ 1.66
SPG7Q9UQ90 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
SPG7Q9UQ90 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC25.42■■□□□ 1.66
SPG7Q9UQ90 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC25.42■■□□□ 1.66
SPG7Q9UQ90 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SPG7Q9UQ90 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SPG7Q9UQ90 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
SPG7Q9UQ90 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SPG7Q9UQ90 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
SPG7Q9UQ90 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC25.42■■□□□ 1.66
SPG7Q9UQ90 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC25.42■■□□□ 1.66
SPG7Q9UQ90 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC25.42■■□□□ 1.66
SPG7Q9UQ90 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
SPG7Q9UQ90 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
SPG7Q9UQ90 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SPG7Q9UQ90 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC25.41■■□□□ 1.66
SPG7Q9UQ90 AP003041.3-201ENST00000527151 707 ntBASIC25.41■■□□□ 1.66
SPG7Q9UQ90 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC25.41■■□□□ 1.66
SPG7Q9UQ90 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC25.41■■□□□ 1.66
SPG7Q9UQ90 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
SPG7Q9UQ90 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SPG7Q9UQ90 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC25.41■■□□□ 1.66
SPG7Q9UQ90 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
SPG7Q9UQ90 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC25.41■■□□□ 1.66
SPG7Q9UQ90 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
SPG7Q9UQ90 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC25.4■■□□□ 1.66
SPG7Q9UQ90 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
SPG7Q9UQ90 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SPG7Q9UQ90 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC25.4■■□□□ 1.66
SPG7Q9UQ90 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC25.4■■□□□ 1.66
SPG7Q9UQ90 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms