Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHA4Q9UN74 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC22.28■■□□□ 1.16
PCDHA4Q9UN74 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC22.28■■□□□ 1.16
PCDHA4Q9UN74 ZNF815P-204ENST00000434898 1737 ntBASIC22.28■■□□□ 1.16
PCDHA4Q9UN74 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHA4Q9UN74 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC22.28■■□□□ 1.16
PCDHA4Q9UN74 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHA4Q9UN74 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC22.27■■□□□ 1.16
PCDHA4Q9UN74 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHA4Q9UN74 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHA4Q9UN74 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
PCDHA4Q9UN74 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHA4Q9UN74 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
PCDHA4Q9UN74 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
PCDHA4Q9UN74 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC22.27■■□□□ 1.16
PCDHA4Q9UN74 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHA4Q9UN74 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHA4Q9UN74 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHA4Q9UN74 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHA4Q9UN74 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHA4Q9UN74 Z82202.1-201ENST00000623446 1880 ntBASIC22.27■■□□□ 1.16
PCDHA4Q9UN74 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
PCDHA4Q9UN74 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC22.27■■□□□ 1.16
PCDHA4Q9UN74 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC22.27■■□□□ 1.16
PCDHA4Q9UN74 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC22.27■■□□□ 1.16
PCDHA4Q9UN74 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
PCDHA4Q9UN74 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHA4Q9UN74 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHA4Q9UN74 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHA4Q9UN74 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHA4Q9UN74 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHA4Q9UN74 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHA4Q9UN74 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHA4Q9UN74 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHA4Q9UN74 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC22.26■■□□□ 1.15
PCDHA4Q9UN74 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC22.26■■□□□ 1.15
PCDHA4Q9UN74 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC22.26■■□□□ 1.15
PCDHA4Q9UN74 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC22.26■■□□□ 1.15
PCDHA4Q9UN74 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
PCDHA4Q9UN74 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHA4Q9UN74 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC22.26■■□□□ 1.15
PCDHA4Q9UN74 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC22.26■■□□□ 1.15
PCDHA4Q9UN74 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHA4Q9UN74 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHA4Q9UN74 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHA4Q9UN74 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC22.26■■□□□ 1.15
PCDHA4Q9UN74 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHA4Q9UN74 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHA4Q9UN74 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC22.26■■□□□ 1.15
PCDHA4Q9UN74 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHA4Q9UN74 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHA4Q9UN74 AC093484.2-201ENST00000580996 2166 ntBASIC22.25■■□□□ 1.15
PCDHA4Q9UN74 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC22.25■■□□□ 1.15
PCDHA4Q9UN74 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
PCDHA4Q9UN74 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHA4Q9UN74 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC22.25■■□□□ 1.15
PCDHA4Q9UN74 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC22.25■■□□□ 1.15
PCDHA4Q9UN74 AL353708.3-201ENST00000610272 989 ntBASIC22.25■■□□□ 1.15
PCDHA4Q9UN74 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHA4Q9UN74 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
PCDHA4Q9UN74 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
PCDHA4Q9UN74 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC22.25■■□□□ 1.15
PCDHA4Q9UN74 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC22.25■■□□□ 1.15
PCDHA4Q9UN74 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHA4Q9UN74 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHA4Q9UN74 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHA4Q9UN74 AC104417.2-201ENST00000562989 1793 ntBASIC22.25■■□□□ 1.15
PCDHA4Q9UN74 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHA4Q9UN74 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHA4Q9UN74 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHA4Q9UN74 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHA4Q9UN74 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
PCDHA4Q9UN74 AL353807.1-201ENST00000427475 662 ntBASIC22.24■■□□□ 1.15
PCDHA4Q9UN74 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHA4Q9UN74 FDX2-207ENST00000494368 584 ntTSL 4 BASIC22.24■■□□□ 1.15
PCDHA4Q9UN74 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC22.24■■□□□ 1.15
PCDHA4Q9UN74 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC22.24■■□□□ 1.15
PCDHA4Q9UN74 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC22.24■■□□□ 1.15
PCDHA4Q9UN74 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC22.24■■□□□ 1.15
PCDHA4Q9UN74 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHA4Q9UN74 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHA4Q9UN74 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC22.24■■□□□ 1.15
PCDHA4Q9UN74 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHA4Q9UN74 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC22.24■■□□□ 1.15
PCDHA4Q9UN74 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHA4Q9UN74 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC22.24■■□□□ 1.15
PCDHA4Q9UN74 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHA4Q9UN74 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHA4Q9UN74 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHA4Q9UN74 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
PCDHA4Q9UN74 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHA4Q9UN74 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHA4Q9UN74 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHA4Q9UN74 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHA4Q9UN74 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHA4Q9UN74 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
PCDHA4Q9UN74 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC22.23■■□□□ 1.15
PCDHA4Q9UN74 NIFKP9-201ENST00000419265 221 ntBASIC22.23■■□□□ 1.15
PCDHA4Q9UN74 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHA4Q9UN74 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms