Protein–RNA interactions for Protein: Q9UKN5

PRDM4, PR domain zinc finger protein 4, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4Q9UKN5 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
PRDM4Q9UKN5 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRDM4Q9UKN5 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.06■□□□□ 0.8
PRDM4Q9UKN5 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC20.06■□□□□ 0.8
PRDM4Q9UKN5 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRDM4Q9UKN5 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC20.06■□□□□ 0.8
PRDM4Q9UKN5 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
PRDM4Q9UKN5 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC20.06■□□□□ 0.8
PRDM4Q9UKN5 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC20.06■□□□□ 0.8
PRDM4Q9UKN5 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRDM4Q9UKN5 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRDM4Q9UKN5 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRDM4Q9UKN5 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.06■□□□□ 0.8
PRDM4Q9UKN5 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRDM4Q9UKN5 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRDM4Q9UKN5 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PRDM4Q9UKN5 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PRDM4Q9UKN5 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC20.06■□□□□ 0.8
PRDM4Q9UKN5 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.06■□□□□ 0.8
PRDM4Q9UKN5 AC108860.2-201ENST00000562760 2183 ntBASIC20.06■□□□□ 0.8
PRDM4Q9UKN5 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.06■□□□□ 0.8
PRDM4Q9UKN5 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.06■□□□□ 0.8
PRDM4Q9UKN5 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PRDM4Q9UKN5 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRDM4Q9UKN5 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRDM4Q9UKN5 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
PRDM4Q9UKN5 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.06■□□□□ 0.8
PRDM4Q9UKN5 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRDM4Q9UKN5 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC20.06■□□□□ 0.8
PRDM4Q9UKN5 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC20.06■□□□□ 0.8
PRDM4Q9UKN5 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC20.06■□□□□ 0.8
PRDM4Q9UKN5 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRDM4Q9UKN5 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PRDM4Q9UKN5 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRDM4Q9UKN5 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRDM4Q9UKN5 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRDM4Q9UKN5 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRDM4Q9UKN5 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
PRDM4Q9UKN5 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRDM4Q9UKN5 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC20.05■□□□□ 0.8
PRDM4Q9UKN5 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
PRDM4Q9UKN5 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRDM4Q9UKN5 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
PRDM4Q9UKN5 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.05■□□□□ 0.8
PRDM4Q9UKN5 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PRDM4Q9UKN5 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
PRDM4Q9UKN5 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.05■□□□□ 0.8
PRDM4Q9UKN5 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC20.05■□□□□ 0.8
PRDM4Q9UKN5 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
PRDM4Q9UKN5 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
PRDM4Q9UKN5 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
PRDM4Q9UKN5 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRDM4Q9UKN5 TMEM179-206ENST00000616017 1645 ntBASIC20.05■□□□□ 0.8
PRDM4Q9UKN5 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRDM4Q9UKN5 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRDM4Q9UKN5 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC20.05■□□□□ 0.8
PRDM4Q9UKN5 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRDM4Q9UKN5 MYB-242ENST00000618728 3545 ntTSL 5 BASIC20.05■□□□□ 0.8
PRDM4Q9UKN5 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRDM4Q9UKN5 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRDM4Q9UKN5 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PRDM4Q9UKN5 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PRDM4Q9UKN5 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRDM4Q9UKN5 MADD-208ENST00000405573 1823 ntTSL 5 BASIC20.04■□□□□ 0.8
PRDM4Q9UKN5 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
PRDM4Q9UKN5 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC20.04■□□□□ 0.8
PRDM4Q9UKN5 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC20.04■□□□□ 0.8
PRDM4Q9UKN5 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.04■□□□□ 0.8
PRDM4Q9UKN5 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
PRDM4Q9UKN5 PCDHB19P-201ENST00000570871 2371 ntBASIC20.04■□□□□ 0.8
PRDM4Q9UKN5 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
PRDM4Q9UKN5 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.04■□□□□ 0.8
PRDM4Q9UKN5 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.04■□□□□ 0.8
PRDM4Q9UKN5 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRDM4Q9UKN5 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC20.04■□□□□ 0.8
PRDM4Q9UKN5 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PRDM4Q9UKN5 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PRDM4Q9UKN5 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRDM4Q9UKN5 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC20.04■□□□□ 0.8
PRDM4Q9UKN5 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRDM4Q9UKN5 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
PRDM4Q9UKN5 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
PRDM4Q9UKN5 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PRDM4Q9UKN5 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PRDM4Q9UKN5 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC20.04■□□□□ 0.8
PRDM4Q9UKN5 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRDM4Q9UKN5 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRDM4Q9UKN5 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
PRDM4Q9UKN5 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRDM4Q9UKN5 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRDM4Q9UKN5 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRDM4Q9UKN5 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC20.03■□□□□ 0.8
PRDM4Q9UKN5 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.03■□□□□ 0.8
PRDM4Q9UKN5 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC20.03■□□□□ 0.8
PRDM4Q9UKN5 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PRDM4Q9UKN5 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.03■□□□□ 0.8
PRDM4Q9UKN5 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRDM4Q9UKN5 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC20.03■□□□□ 0.8
PRDM4Q9UKN5 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRDM4Q9UKN5 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms