Protein–RNA interactions for Protein: Q9UJQ4

SALL4, Sal-like protein 4, humanhuman

Predictions only

Length 1,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4Q9UJQ4 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SALL4Q9UJQ4 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SALL4Q9UJQ4 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.68■□□□□ 0.9
SALL4Q9UJQ4 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.68■□□□□ 0.9
SALL4Q9UJQ4 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.68■□□□□ 0.9
SALL4Q9UJQ4 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.68■□□□□ 0.9
SALL4Q9UJQ4 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SALL4Q9UJQ4 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
SALL4Q9UJQ4 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SALL4Q9UJQ4 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.68■□□□□ 0.9
SALL4Q9UJQ4 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
SALL4Q9UJQ4 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
SALL4Q9UJQ4 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SALL4Q9UJQ4 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SALL4Q9UJQ4 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SALL4Q9UJQ4 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.68■□□□□ 0.9
SALL4Q9UJQ4 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SALL4Q9UJQ4 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SALL4Q9UJQ4 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.68■□□□□ 0.9
SALL4Q9UJQ4 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SALL4Q9UJQ4 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SALL4Q9UJQ4 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SALL4Q9UJQ4 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SALL4Q9UJQ4 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SALL4Q9UJQ4 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SALL4Q9UJQ4 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SALL4Q9UJQ4 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.67■□□□□ 0.9
SALL4Q9UJQ4 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SALL4Q9UJQ4 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SALL4Q9UJQ4 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.67■□□□□ 0.9
SALL4Q9UJQ4 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.67■□□□□ 0.9
SALL4Q9UJQ4 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SALL4Q9UJQ4 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SALL4Q9UJQ4 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SALL4Q9UJQ4 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SALL4Q9UJQ4 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.67■□□□□ 0.9
SALL4Q9UJQ4 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.67■□□□□ 0.9
SALL4Q9UJQ4 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.67■□□□□ 0.9
SALL4Q9UJQ4 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.67■□□□□ 0.9
SALL4Q9UJQ4 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.67■□□□□ 0.9
SALL4Q9UJQ4 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SALL4Q9UJQ4 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SALL4Q9UJQ4 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SALL4Q9UJQ4 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SALL4Q9UJQ4 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.66■□□□□ 0.9
SALL4Q9UJQ4 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SALL4Q9UJQ4 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SALL4Q9UJQ4 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
SALL4Q9UJQ4 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
SALL4Q9UJQ4 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.66■□□□□ 0.9
SALL4Q9UJQ4 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.66■□□□□ 0.9
SALL4Q9UJQ4 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.66■□□□□ 0.9
SALL4Q9UJQ4 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.66■□□□□ 0.9
SALL4Q9UJQ4 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.66■□□□□ 0.9
SALL4Q9UJQ4 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
SALL4Q9UJQ4 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.66■□□□□ 0.9
SALL4Q9UJQ4 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SALL4Q9UJQ4 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
SALL4Q9UJQ4 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SALL4Q9UJQ4 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.66■□□□□ 0.9
SALL4Q9UJQ4 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SALL4Q9UJQ4 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SALL4Q9UJQ4 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
SALL4Q9UJQ4 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.66■□□□□ 0.9
SALL4Q9UJQ4 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SALL4Q9UJQ4 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SALL4Q9UJQ4 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SALL4Q9UJQ4 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.65■□□□□ 0.9
SALL4Q9UJQ4 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SALL4Q9UJQ4 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.65■□□□□ 0.9
SALL4Q9UJQ4 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SALL4Q9UJQ4 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.65■□□□□ 0.9
SALL4Q9UJQ4 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
SALL4Q9UJQ4 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SALL4Q9UJQ4 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.65■□□□□ 0.9
SALL4Q9UJQ4 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SALL4Q9UJQ4 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SALL4Q9UJQ4 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.65■□□□□ 0.9
SALL4Q9UJQ4 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.65■□□□□ 0.9
SALL4Q9UJQ4 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.65■□□□□ 0.9
SALL4Q9UJQ4 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
SALL4Q9UJQ4 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SALL4Q9UJQ4 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SALL4Q9UJQ4 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
SALL4Q9UJQ4 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.65■□□□□ 0.9
SALL4Q9UJQ4 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
SALL4Q9UJQ4 AC009113.1-201ENST00000570267 2443 ntBASIC20.65■□□□□ 0.9
SALL4Q9UJQ4 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SALL4Q9UJQ4 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.65■□□□□ 0.9
SALL4Q9UJQ4 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
SALL4Q9UJQ4 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SALL4Q9UJQ4 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SALL4Q9UJQ4 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SALL4Q9UJQ4 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.64■□□□□ 0.9
SALL4Q9UJQ4 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SALL4Q9UJQ4 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
SALL4Q9UJQ4 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SALL4Q9UJQ4 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SALL4Q9UJQ4 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.64■□□□□ 0.89
SALL4Q9UJQ4 LSM12P1-201ENST00000411836 588 ntBASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms