Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CISHQ9NSE2 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CISHQ9NSE2 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CISHQ9NSE2 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CISHQ9NSE2 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.78■□□□□ 0.92
CISHQ9NSE2 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CISHQ9NSE2 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CISHQ9NSE2 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CISHQ9NSE2 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
CISHQ9NSE2 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CISHQ9NSE2 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.78■□□□□ 0.92
CISHQ9NSE2 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CISHQ9NSE2 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CISHQ9NSE2 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CISHQ9NSE2 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.78■□□□□ 0.92
CISHQ9NSE2 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CISHQ9NSE2 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.78■□□□□ 0.92
CISHQ9NSE2 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CISHQ9NSE2 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.78■□□□□ 0.92
CISHQ9NSE2 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.78■□□□□ 0.92
CISHQ9NSE2 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
CISHQ9NSE2 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CISHQ9NSE2 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CISHQ9NSE2 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CISHQ9NSE2 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.77■□□□□ 0.92
CISHQ9NSE2 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.77■□□□□ 0.92
CISHQ9NSE2 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CISHQ9NSE2 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CISHQ9NSE2 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
CISHQ9NSE2 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CISHQ9NSE2 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CISHQ9NSE2 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.77■□□□□ 0.92
CISHQ9NSE2 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.77■□□□□ 0.92
CISHQ9NSE2 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.77■□□□□ 0.92
CISHQ9NSE2 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.77■□□□□ 0.92
CISHQ9NSE2 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CISHQ9NSE2 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CISHQ9NSE2 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.77■□□□□ 0.92
CISHQ9NSE2 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.77■□□□□ 0.92
CISHQ9NSE2 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.77■□□□□ 0.91
CISHQ9NSE2 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.77■□□□□ 0.91
CISHQ9NSE2 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CISHQ9NSE2 HTR7P1-201ENST00000538670 1336 ntBASIC20.77■□□□□ 0.91
CISHQ9NSE2 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.77■□□□□ 0.91
CISHQ9NSE2 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CISHQ9NSE2 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CISHQ9NSE2 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.76■□□□□ 0.91
CISHQ9NSE2 AC093484.2-201ENST00000580996 2166 ntBASIC20.76■□□□□ 0.91
CISHQ9NSE2 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
CISHQ9NSE2 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.76■□□□□ 0.91
CISHQ9NSE2 Z82202.1-201ENST00000623446 1880 ntBASIC20.76■□□□□ 0.91
CISHQ9NSE2 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CISHQ9NSE2 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CISHQ9NSE2 UBE2SP1-201ENST00000450587 669 ntBASIC20.76■□□□□ 0.91
CISHQ9NSE2 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.76■□□□□ 0.91
CISHQ9NSE2 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CISHQ9NSE2 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.76■□□□□ 0.91
CISHQ9NSE2 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CISHQ9NSE2 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CISHQ9NSE2 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CISHQ9NSE2 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CISHQ9NSE2 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CISHQ9NSE2 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CISHQ9NSE2 ZNF815P-204ENST00000434898 1737 ntBASIC20.75■□□□□ 0.91
CISHQ9NSE2 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.75■□□□□ 0.91
CISHQ9NSE2 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CISHQ9NSE2 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CISHQ9NSE2 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CISHQ9NSE2 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.75■□□□□ 0.91
CISHQ9NSE2 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.75■□□□□ 0.91
CISHQ9NSE2 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CISHQ9NSE2 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CISHQ9NSE2 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CISHQ9NSE2 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CISHQ9NSE2 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CISHQ9NSE2 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CISHQ9NSE2 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.75■□□□□ 0.91
CISHQ9NSE2 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CISHQ9NSE2 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.75■□□□□ 0.91
CISHQ9NSE2 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CISHQ9NSE2 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.75■□□□□ 0.91
CISHQ9NSE2 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CISHQ9NSE2 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.75■□□□□ 0.91
CISHQ9NSE2 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CISHQ9NSE2 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CISHQ9NSE2 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CISHQ9NSE2 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CISHQ9NSE2 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CISHQ9NSE2 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.74■□□□□ 0.91
CISHQ9NSE2 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CISHQ9NSE2 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CISHQ9NSE2 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.74■□□□□ 0.91
CISHQ9NSE2 AC007952.6-201ENST00000573168 2673 ntBASIC20.74■□□□□ 0.91
CISHQ9NSE2 AC003957.1-201ENST00000625108 2673 ntBASIC20.74■□□□□ 0.91
CISHQ9NSE2 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.74■□□□□ 0.91
CISHQ9NSE2 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CISHQ9NSE2 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
CISHQ9NSE2 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CISHQ9NSE2 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CISHQ9NSE2 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms