Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBQLN4Q9NRR5 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBQLN4Q9NRR5 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBQLN4Q9NRR5 KRASP1-201ENST00000407852 552 ntBASIC17.91■□□□□ 0.46
UBQLN4Q9NRR5 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
UBQLN4Q9NRR5 AC133681.1-201ENST00000465482 601 ntBASIC17.91■□□□□ 0.46
UBQLN4Q9NRR5 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.91■□□□□ 0.46
UBQLN4Q9NRR5 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
UBQLN4Q9NRR5 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBQLN4Q9NRR5 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
UBQLN4Q9NRR5 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
UBQLN4Q9NRR5 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.91■□□□□ 0.46
UBQLN4Q9NRR5 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBQLN4Q9NRR5 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.91■□□□□ 0.46
UBQLN4Q9NRR5 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBQLN4Q9NRR5 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
UBQLN4Q9NRR5 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBQLN4Q9NRR5 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
UBQLN4Q9NRR5 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBQLN4Q9NRR5 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBQLN4Q9NRR5 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
UBQLN4Q9NRR5 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
UBQLN4Q9NRR5 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
UBQLN4Q9NRR5 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBQLN4Q9NRR5 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
UBQLN4Q9NRR5 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
UBQLN4Q9NRR5 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.91■□□□□ 0.46
UBQLN4Q9NRR5 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
UBQLN4Q9NRR5 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBQLN4Q9NRR5 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBQLN4Q9NRR5 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBQLN4Q9NRR5 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
UBQLN4Q9NRR5 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.9■□□□□ 0.46
UBQLN4Q9NRR5 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.9■□□□□ 0.46
UBQLN4Q9NRR5 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBQLN4Q9NRR5 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBQLN4Q9NRR5 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.9■□□□□ 0.46
UBQLN4Q9NRR5 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.9■□□□□ 0.46
UBQLN4Q9NRR5 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
UBQLN4Q9NRR5 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.9■□□□□ 0.46
UBQLN4Q9NRR5 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.9■□□□□ 0.46
UBQLN4Q9NRR5 ITM2C-210ENST00000620962 501 ntBASIC17.9■□□□□ 0.46
UBQLN4Q9NRR5 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
UBQLN4Q9NRR5 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.9■□□□□ 0.46
UBQLN4Q9NRR5 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
UBQLN4Q9NRR5 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.9■□□□□ 0.46
UBQLN4Q9NRR5 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.9■□□□□ 0.46
UBQLN4Q9NRR5 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBQLN4Q9NRR5 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
UBQLN4Q9NRR5 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.89■□□□□ 0.46
UBQLN4Q9NRR5 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
UBQLN4Q9NRR5 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
UBQLN4Q9NRR5 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
UBQLN4Q9NRR5 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
UBQLN4Q9NRR5 AC093484.2-201ENST00000580996 2166 ntBASIC17.89■□□□□ 0.45
UBQLN4Q9NRR5 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
UBQLN4Q9NRR5 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
UBQLN4Q9NRR5 KRT18P29-201ENST00000397031 1267 ntBASIC17.89■□□□□ 0.45
UBQLN4Q9NRR5 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.89■□□□□ 0.45
UBQLN4Q9NRR5 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.89■□□□□ 0.45
UBQLN4Q9NRR5 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.89■□□□□ 0.45
UBQLN4Q9NRR5 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.89■□□□□ 0.45
UBQLN4Q9NRR5 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.89■□□□□ 0.45
UBQLN4Q9NRR5 AC124016.1-201ENST00000609552 612 ntBASIC17.89■□□□□ 0.45
UBQLN4Q9NRR5 AC110285.5-201ENST00000611501 352 ntBASIC17.89■□□□□ 0.45
UBQLN4Q9NRR5 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.89■□□□□ 0.45
UBQLN4Q9NRR5 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
UBQLN4Q9NRR5 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UBQLN4Q9NRR5 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UBQLN4Q9NRR5 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.89■□□□□ 0.45
UBQLN4Q9NRR5 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.89■□□□□ 0.45
UBQLN4Q9NRR5 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UBQLN4Q9NRR5 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.89■□□□□ 0.45
UBQLN4Q9NRR5 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
UBQLN4Q9NRR5 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.89■□□□□ 0.45
UBQLN4Q9NRR5 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.88■□□□□ 0.45
UBQLN4Q9NRR5 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBQLN4Q9NRR5 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBQLN4Q9NRR5 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
UBQLN4Q9NRR5 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBQLN4Q9NRR5 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBQLN4Q9NRR5 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBQLN4Q9NRR5 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBQLN4Q9NRR5 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.88■□□□□ 0.45
UBQLN4Q9NRR5 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
UBQLN4Q9NRR5 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.88■□□□□ 0.45
UBQLN4Q9NRR5 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBQLN4Q9NRR5 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
UBQLN4Q9NRR5 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
UBQLN4Q9NRR5 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBQLN4Q9NRR5 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.88■□□□□ 0.45
UBQLN4Q9NRR5 KRT16P5-201ENST00000455284 522 ntBASIC17.88■□□□□ 0.45
UBQLN4Q9NRR5 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
UBQLN4Q9NRR5 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
UBQLN4Q9NRR5 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
UBQLN4Q9NRR5 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBQLN4Q9NRR5 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBQLN4Q9NRR5 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBQLN4Q9NRR5 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
UBQLN4Q9NRR5 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms