Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
BRF2Q9HAW0 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
BRF2Q9HAW0 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
BRF2Q9HAW0 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
BRF2Q9HAW0 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
BRF2Q9HAW0 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BRF2Q9HAW0 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BRF2Q9HAW0 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BRF2Q9HAW0 TUBB8P6-201ENST00000436895 1288 ntBASIC18.61■□□□□ 0.57
BRF2Q9HAW0 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.61■□□□□ 0.57
BRF2Q9HAW0 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BRF2Q9HAW0 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
BRF2Q9HAW0 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BRF2Q9HAW0 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
BRF2Q9HAW0 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
BRF2Q9HAW0 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
BRF2Q9HAW0 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
BRF2Q9HAW0 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
BRF2Q9HAW0 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.6■□□□□ 0.57
BRF2Q9HAW0 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
BRF2Q9HAW0 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
BRF2Q9HAW0 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BRF2Q9HAW0 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
BRF2Q9HAW0 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
BRF2Q9HAW0 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BRF2Q9HAW0 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BRF2Q9HAW0 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BRF2Q9HAW0 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BRF2Q9HAW0 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BRF2Q9HAW0 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BRF2Q9HAW0 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.6■□□□□ 0.57
BRF2Q9HAW0 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.6■□□□□ 0.57
BRF2Q9HAW0 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BRF2Q9HAW0 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BRF2Q9HAW0 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BRF2Q9HAW0 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BRF2Q9HAW0 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
BRF2Q9HAW0 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
BRF2Q9HAW0 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
BRF2Q9HAW0 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
BRF2Q9HAW0 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
BRF2Q9HAW0 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
BRF2Q9HAW0 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BRF2Q9HAW0 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
BRF2Q9HAW0 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BRF2Q9HAW0 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BRF2Q9HAW0 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.59■□□□□ 0.57
BRF2Q9HAW0 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.59■□□□□ 0.57
BRF2Q9HAW0 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BRF2Q9HAW0 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BRF2Q9HAW0 LINC01465-201ENST00000408887 1940 ntBASIC18.59■□□□□ 0.57
BRF2Q9HAW0 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BRF2Q9HAW0 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BRF2Q9HAW0 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.59■□□□□ 0.57
BRF2Q9HAW0 AP000974.1-201ENST00000623909 2387 ntBASIC18.59■□□□□ 0.57
BRF2Q9HAW0 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BRF2Q9HAW0 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
BRF2Q9HAW0 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BRF2Q9HAW0 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.59■□□□□ 0.57
BRF2Q9HAW0 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.59■□□□□ 0.57
BRF2Q9HAW0 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
BRF2Q9HAW0 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.59■□□□□ 0.57
BRF2Q9HAW0 PRKY-204ENST00000533551 1019 ntBASIC18.59■□□□□ 0.57
BRF2Q9HAW0 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.59■□□□□ 0.57
BRF2Q9HAW0 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.59■□□□□ 0.57
BRF2Q9HAW0 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.59■□□□□ 0.57
BRF2Q9HAW0 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
BRF2Q9HAW0 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BRF2Q9HAW0 AC104417.2-201ENST00000562989 1793 ntBASIC18.59■□□□□ 0.57
BRF2Q9HAW0 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BRF2Q9HAW0 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BRF2Q9HAW0 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
BRF2Q9HAW0 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
BRF2Q9HAW0 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BRF2Q9HAW0 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.59■□□□□ 0.57
BRF2Q9HAW0 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
BRF2Q9HAW0 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.58■□□□□ 0.57
BRF2Q9HAW0 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
BRF2Q9HAW0 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
BRF2Q9HAW0 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
BRF2Q9HAW0 AC141586.3-201ENST00000562166 1838 ntBASIC18.58■□□□□ 0.57
BRF2Q9HAW0 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.57
BRF2Q9HAW0 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.58■□□□□ 0.57
BRF2Q9HAW0 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
BRF2Q9HAW0 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
BRF2Q9HAW0 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.58■□□□□ 0.56
BRF2Q9HAW0 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.58■□□□□ 0.56
BRF2Q9HAW0 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
BRF2Q9HAW0 AC008403.3-201ENST00000598924 454 ntBASIC18.58■□□□□ 0.56
BRF2Q9HAW0 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
BRF2Q9HAW0 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
BRF2Q9HAW0 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
BRF2Q9HAW0 AC098818.2-201ENST00000564925 2320 ntBASIC18.58■□□□□ 0.56
BRF2Q9HAW0 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
BRF2Q9HAW0 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
BRF2Q9HAW0 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.58■□□□□ 0.56
BRF2Q9HAW0 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.58■□□□□ 0.56
BRF2Q9HAW0 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.58■□□□□ 0.56
BRF2Q9HAW0 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
BRF2Q9HAW0 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms