Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AC098818.2-201ENST00000564925 2320 ntBASIC19.76■□□□□ 0.75
LRRC40Q9H9A6 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRRC40Q9H9A6 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.76■□□□□ 0.75
LRRC40Q9H9A6 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRRC40Q9H9A6 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRRC40Q9H9A6 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.75■□□□□ 0.75
LRRC40Q9H9A6 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LRRC40Q9H9A6 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LRRC40Q9H9A6 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LRRC40Q9H9A6 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRRC40Q9H9A6 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRRC40Q9H9A6 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
LRRC40Q9H9A6 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LRRC40Q9H9A6 AP000974.1-201ENST00000623909 2387 ntBASIC19.75■□□□□ 0.75
LRRC40Q9H9A6 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.75■□□□□ 0.75
LRRC40Q9H9A6 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRRC40Q9H9A6 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRRC40Q9H9A6 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
LRRC40Q9H9A6 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.75■□□□□ 0.75
LRRC40Q9H9A6 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRRC40Q9H9A6 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
LRRC40Q9H9A6 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
LRRC40Q9H9A6 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
LRRC40Q9H9A6 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRRC40Q9H9A6 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
LRRC40Q9H9A6 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRRC40Q9H9A6 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRRC40Q9H9A6 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.75■□□□□ 0.75
LRRC40Q9H9A6 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRRC40Q9H9A6 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRRC40Q9H9A6 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LRRC40Q9H9A6 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.74■□□□□ 0.75
LRRC40Q9H9A6 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.74■□□□□ 0.75
LRRC40Q9H9A6 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
LRRC40Q9H9A6 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LRRC40Q9H9A6 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LRRC40Q9H9A6 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LRRC40Q9H9A6 POM121L13P-201ENST00000422362 380 ntBASIC19.74■□□□□ 0.75
LRRC40Q9H9A6 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.74■□□□□ 0.75
LRRC40Q9H9A6 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.74■□□□□ 0.75
LRRC40Q9H9A6 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.74■□□□□ 0.75
LRRC40Q9H9A6 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.74■□□□□ 0.75
LRRC40Q9H9A6 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.74■□□□□ 0.75
LRRC40Q9H9A6 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.74■□□□□ 0.75
LRRC40Q9H9A6 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.74■□□□□ 0.75
LRRC40Q9H9A6 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
LRRC40Q9H9A6 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LRRC40Q9H9A6 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LRRC40Q9H9A6 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
LRRC40Q9H9A6 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
LRRC40Q9H9A6 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.74■□□□□ 0.75
LRRC40Q9H9A6 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LRRC40Q9H9A6 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.74■□□□□ 0.75
LRRC40Q9H9A6 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LRRC40Q9H9A6 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.74■□□□□ 0.75
LRRC40Q9H9A6 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.74■□□□□ 0.75
LRRC40Q9H9A6 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LRRC40Q9H9A6 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LRRC40Q9H9A6 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRRC40Q9H9A6 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.73■□□□□ 0.75
LRRC40Q9H9A6 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRRC40Q9H9A6 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
LRRC40Q9H9A6 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRRC40Q9H9A6 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRRC40Q9H9A6 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRRC40Q9H9A6 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRRC40Q9H9A6 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LRRC40Q9H9A6 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LRRC40Q9H9A6 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRRC40Q9H9A6 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRRC40Q9H9A6 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.73■□□□□ 0.75
LRRC40Q9H9A6 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.73■□□□□ 0.75
LRRC40Q9H9A6 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.73■□□□□ 0.75
LRRC40Q9H9A6 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
LRRC40Q9H9A6 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
LRRC40Q9H9A6 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRRC40Q9H9A6 KRT8P8-201ENST00000434750 1448 ntBASIC19.73■□□□□ 0.75
LRRC40Q9H9A6 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRRC40Q9H9A6 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LRRC40Q9H9A6 ZNF815P-204ENST00000434898 1737 ntBASIC19.73■□□□□ 0.75
LRRC40Q9H9A6 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
LRRC40Q9H9A6 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRRC40Q9H9A6 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LRRC40Q9H9A6 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LRRC40Q9H9A6 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.72■□□□□ 0.75
LRRC40Q9H9A6 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRRC40Q9H9A6 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LRRC40Q9H9A6 KRT18P16-201ENST00000510337 1294 ntBASIC19.72■□□□□ 0.75
LRRC40Q9H9A6 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRRC40Q9H9A6 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.72■□□□□ 0.75
LRRC40Q9H9A6 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.72■□□□□ 0.75
LRRC40Q9H9A6 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRRC40Q9H9A6 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
LRRC40Q9H9A6 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRRC40Q9H9A6 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRRC40Q9H9A6 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRRC40Q9H9A6 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRRC40Q9H9A6 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.72■□□□□ 0.75
LRRC40Q9H9A6 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LRRC40Q9H9A6 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms