Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC24.55■■□□□ 1.52
CHMP4BQ9H444 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC24.55■■□□□ 1.52
CHMP4BQ9H444 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
CHMP4BQ9H444 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC24.54■■□□□ 1.52
CHMP4BQ9H444 BX323043.1-201ENST00000641006 1765 ntBASIC24.54■■□□□ 1.52
CHMP4BQ9H444 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC24.54■■□□□ 1.52
CHMP4BQ9H444 AL032819.2-201ENST00000624543 2162 ntBASIC24.54■■□□□ 1.52
CHMP4BQ9H444 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CHMP4BQ9H444 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
CHMP4BQ9H444 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CHMP4BQ9H444 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CHMP4BQ9H444 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CHMP4BQ9H444 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC24.54■■□□□ 1.52
CHMP4BQ9H444 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC24.54■■□□□ 1.52
CHMP4BQ9H444 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CHMP4BQ9H444 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CHMP4BQ9H444 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC24.54■■□□□ 1.52
CHMP4BQ9H444 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC24.54■■□□□ 1.52
CHMP4BQ9H444 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC24.54■■□□□ 1.52
CHMP4BQ9H444 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC24.54■■□□□ 1.52
CHMP4BQ9H444 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CHMP4BQ9H444 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CHMP4BQ9H444 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
CHMP4BQ9H444 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CHMP4BQ9H444 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CHMP4BQ9H444 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CHMP4BQ9H444 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CHMP4BQ9H444 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC24.53■■□□□ 1.52
CHMP4BQ9H444 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CHMP4BQ9H444 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC24.53■■□□□ 1.52
CHMP4BQ9H444 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CHMP4BQ9H444 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
CHMP4BQ9H444 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
CHMP4BQ9H444 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC24.53■■□□□ 1.52
CHMP4BQ9H444 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
CHMP4BQ9H444 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC24.53■■□□□ 1.52
CHMP4BQ9H444 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC24.53■■□□□ 1.52
CHMP4BQ9H444 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CHMP4BQ9H444 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CHMP4BQ9H444 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
CHMP4BQ9H444 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
CHMP4BQ9H444 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC24.53■■□□□ 1.52
CHMP4BQ9H444 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CHMP4BQ9H444 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CHMP4BQ9H444 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CHMP4BQ9H444 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
CHMP4BQ9H444 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC24.52■■□□□ 1.52
CHMP4BQ9H444 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CHMP4BQ9H444 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC24.52■■□□□ 1.52
CHMP4BQ9H444 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC24.52■■□□□ 1.52
CHMP4BQ9H444 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC24.52■■□□□ 1.52
CHMP4BQ9H444 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC24.52■■□□□ 1.52
CHMP4BQ9H444 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC24.52■■□□□ 1.52
CHMP4BQ9H444 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC24.52■■□□□ 1.52
CHMP4BQ9H444 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC24.52■■□□□ 1.52
CHMP4BQ9H444 AC004264.1-201ENST00000608354 794 ntBASIC24.52■■□□□ 1.52
CHMP4BQ9H444 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CHMP4BQ9H444 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
CHMP4BQ9H444 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
CHMP4BQ9H444 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC24.52■■□□□ 1.52
CHMP4BQ9H444 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
CHMP4BQ9H444 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CHMP4BQ9H444 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
CHMP4BQ9H444 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CHMP4BQ9H444 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CHMP4BQ9H444 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC24.51■■□□□ 1.51
CHMP4BQ9H444 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
CHMP4BQ9H444 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CHMP4BQ9H444 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CHMP4BQ9H444 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CHMP4BQ9H444 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CHMP4BQ9H444 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
CHMP4BQ9H444 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC24.51■■□□□ 1.51
CHMP4BQ9H444 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CHMP4BQ9H444 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
CHMP4BQ9H444 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC24.51■■□□□ 1.51
CHMP4BQ9H444 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC24.51■■□□□ 1.51
CHMP4BQ9H444 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC24.5■■□□□ 1.51
CHMP4BQ9H444 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC24.5■■□□□ 1.51
CHMP4BQ9H444 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC24.5■■□□□ 1.51
CHMP4BQ9H444 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CHMP4BQ9H444 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
CHMP4BQ9H444 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CHMP4BQ9H444 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CHMP4BQ9H444 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC24.5■■□□□ 1.51
CHMP4BQ9H444 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC24.5■■□□□ 1.51
CHMP4BQ9H444 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC24.5■■□□□ 1.51
CHMP4BQ9H444 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC24.5■■□□□ 1.51
CHMP4BQ9H444 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC24.5■■□□□ 1.51
CHMP4BQ9H444 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC24.5■■□□□ 1.51
CHMP4BQ9H444 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
CHMP4BQ9H444 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC24.5■■□□□ 1.51
CHMP4BQ9H444 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CHMP4BQ9H444 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CHMP4BQ9H444 NBPF21P-201ENST00000425093 1451 ntBASIC24.5■■□□□ 1.51
CHMP4BQ9H444 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC24.5■■□□□ 1.51
CHMP4BQ9H444 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC24.5■■□□□ 1.51
CHMP4BQ9H444 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CHMP4BQ9H444 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CHMP4BQ9H444 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC24.5■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms