Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DDX47Q9H0S4 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.27■□□□□ 0.84
DDX47Q9H0S4 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
DDX47Q9H0S4 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
DDX47Q9H0S4 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DDX47Q9H0S4 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DDX47Q9H0S4 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
DDX47Q9H0S4 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.27■□□□□ 0.84
DDX47Q9H0S4 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
DDX47Q9H0S4 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
DDX47Q9H0S4 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DDX47Q9H0S4 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
DDX47Q9H0S4 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.27■□□□□ 0.84
DDX47Q9H0S4 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
DDX47Q9H0S4 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.27■□□□□ 0.84
DDX47Q9H0S4 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.27■□□□□ 0.84
DDX47Q9H0S4 AC011767.1-201ENST00000617410 1153 ntBASIC20.27■□□□□ 0.84
DDX47Q9H0S4 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.27■□□□□ 0.84
DDX47Q9H0S4 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
DDX47Q9H0S4 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.27■□□□□ 0.84
DDX47Q9H0S4 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.27■□□□□ 0.83
DDX47Q9H0S4 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
DDX47Q9H0S4 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
DDX47Q9H0S4 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.27■□□□□ 0.83
DDX47Q9H0S4 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
DDX47Q9H0S4 AIRN-201ENST00000601203 4374 ntBASIC20.26■□□□□ 0.83
DDX47Q9H0S4 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.26■□□□□ 0.83
DDX47Q9H0S4 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
DDX47Q9H0S4 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.26■□□□□ 0.83
DDX47Q9H0S4 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
DDX47Q9H0S4 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
DDX47Q9H0S4 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.26■□□□□ 0.83
DDX47Q9H0S4 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.26■□□□□ 0.83
DDX47Q9H0S4 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.26■□□□□ 0.83
DDX47Q9H0S4 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.26■□□□□ 0.83
DDX47Q9H0S4 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
DDX47Q9H0S4 AC005082.1-201ENST00000413042 2259 ntBASIC20.25■□□□□ 0.83
DDX47Q9H0S4 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.25■□□□□ 0.83
DDX47Q9H0S4 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.25■□□□□ 0.83
DDX47Q9H0S4 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
DDX47Q9H0S4 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
DDX47Q9H0S4 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
DDX47Q9H0S4 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.25■□□□□ 0.83
DDX47Q9H0S4 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.25■□□□□ 0.83
DDX47Q9H0S4 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
DDX47Q9H0S4 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.25■□□□□ 0.83
DDX47Q9H0S4 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
DDX47Q9H0S4 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.25■□□□□ 0.83
DDX47Q9H0S4 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.25■□□□□ 0.83
DDX47Q9H0S4 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
DDX47Q9H0S4 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
DDX47Q9H0S4 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
DDX47Q9H0S4 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
DDX47Q9H0S4 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
DDX47Q9H0S4 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
DDX47Q9H0S4 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
DDX47Q9H0S4 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.25■□□□□ 0.83
DDX47Q9H0S4 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
DDX47Q9H0S4 AC116351.2-201ENST00000606540 1585 ntBASIC20.25■□□□□ 0.83
DDX47Q9H0S4 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
DDX47Q9H0S4 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
DDX47Q9H0S4 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
DDX47Q9H0S4 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
DDX47Q9H0S4 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
DDX47Q9H0S4 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
DDX47Q9H0S4 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC20.24■□□□□ 0.83
DDX47Q9H0S4 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
DDX47Q9H0S4 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
DDX47Q9H0S4 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
DDX47Q9H0S4 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
DDX47Q9H0S4 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
DDX47Q9H0S4 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
DDX47Q9H0S4 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
DDX47Q9H0S4 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
DDX47Q9H0S4 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.24■□□□□ 0.83
DDX47Q9H0S4 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.24■□□□□ 0.83
DDX47Q9H0S4 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.24■□□□□ 0.83
DDX47Q9H0S4 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.24■□□□□ 0.83
DDX47Q9H0S4 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.24■□□□□ 0.83
DDX47Q9H0S4 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
DDX47Q9H0S4 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
DDX47Q9H0S4 AC069236.1-201ENST00000604339 616 ntBASIC20.24■□□□□ 0.83
DDX47Q9H0S4 AL589743.5-201ENST00000616611 1050 ntBASIC20.24■□□□□ 0.83
DDX47Q9H0S4 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.24■□□□□ 0.83
DDX47Q9H0S4 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
DDX47Q9H0S4 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
DDX47Q9H0S4 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.24■□□□□ 0.83
DDX47Q9H0S4 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.24■□□□□ 0.83
DDX47Q9H0S4 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
DDX47Q9H0S4 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.24■□□□□ 0.83
DDX47Q9H0S4 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
DDX47Q9H0S4 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
DDX47Q9H0S4 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
DDX47Q9H0S4 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
DDX47Q9H0S4 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
DDX47Q9H0S4 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
DDX47Q9H0S4 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
DDX47Q9H0S4 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
DDX47Q9H0S4 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
DDX47Q9H0S4 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms