Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDK5RAP1Q96SZ6 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDK5RAP1Q96SZ6 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.21■□□□□ 0.83
CDK5RAP1Q96SZ6 AC004951.3-201ENST00000418645 1148 ntBASIC20.21■□□□□ 0.83
CDK5RAP1Q96SZ6 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.21■□□□□ 0.83
CDK5RAP1Q96SZ6 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.21■□□□□ 0.83
CDK5RAP1Q96SZ6 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.21■□□□□ 0.83
CDK5RAP1Q96SZ6 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.21■□□□□ 0.83
CDK5RAP1Q96SZ6 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.21■□□□□ 0.83
CDK5RAP1Q96SZ6 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDK5RAP1Q96SZ6 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.21■□□□□ 0.83
CDK5RAP1Q96SZ6 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDK5RAP1Q96SZ6 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDK5RAP1Q96SZ6 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDK5RAP1Q96SZ6 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.21■□□□□ 0.83
CDK5RAP1Q96SZ6 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDK5RAP1Q96SZ6 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDK5RAP1Q96SZ6 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
CDK5RAP1Q96SZ6 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDK5RAP1Q96SZ6 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDK5RAP1Q96SZ6 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CDK5RAP1Q96SZ6 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.2■□□□□ 0.82
CDK5RAP1Q96SZ6 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDK5RAP1Q96SZ6 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CDK5RAP1Q96SZ6 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.2■□□□□ 0.82
CDK5RAP1Q96SZ6 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.2■□□□□ 0.82
CDK5RAP1Q96SZ6 MMP23A-201ENST00000234610 1017 ntBASIC20.2■□□□□ 0.82
CDK5RAP1Q96SZ6 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDK5RAP1Q96SZ6 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CDK5RAP1Q96SZ6 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDK5RAP1Q96SZ6 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.2■□□□□ 0.82
CDK5RAP1Q96SZ6 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.2■□□□□ 0.82
CDK5RAP1Q96SZ6 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDK5RAP1Q96SZ6 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.2■□□□□ 0.82
CDK5RAP1Q96SZ6 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDK5RAP1Q96SZ6 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.2■□□□□ 0.82
CDK5RAP1Q96SZ6 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.2■□□□□ 0.82
CDK5RAP1Q96SZ6 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.2■□□□□ 0.82
CDK5RAP1Q96SZ6 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.2■□□□□ 0.82
CDK5RAP1Q96SZ6 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CDK5RAP1Q96SZ6 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDK5RAP1Q96SZ6 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CDK5RAP1Q96SZ6 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDK5RAP1Q96SZ6 RCC2P6-201ENST00000526625 1557 ntBASIC20.2■□□□□ 0.82
CDK5RAP1Q96SZ6 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CDK5RAP1Q96SZ6 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CDK5RAP1Q96SZ6 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDK5RAP1Q96SZ6 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDK5RAP1Q96SZ6 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDK5RAP1Q96SZ6 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDK5RAP1Q96SZ6 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDK5RAP1Q96SZ6 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.19■□□□□ 0.82
CDK5RAP1Q96SZ6 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDK5RAP1Q96SZ6 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
CDK5RAP1Q96SZ6 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDK5RAP1Q96SZ6 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CDK5RAP1Q96SZ6 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDK5RAP1Q96SZ6 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.19■□□□□ 0.82
CDK5RAP1Q96SZ6 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDK5RAP1Q96SZ6 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDK5RAP1Q96SZ6 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDK5RAP1Q96SZ6 MESTP1-201ENST00000404287 994 ntBASIC20.19■□□□□ 0.82
CDK5RAP1Q96SZ6 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDK5RAP1Q96SZ6 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.19■□□□□ 0.82
CDK5RAP1Q96SZ6 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.19■□□□□ 0.82
CDK5RAP1Q96SZ6 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.19■□□□□ 0.82
CDK5RAP1Q96SZ6 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.19■□□□□ 0.82
CDK5RAP1Q96SZ6 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.19■□□□□ 0.82
CDK5RAP1Q96SZ6 AC130371.2-201ENST00000619443 611 ntBASIC20.19■□□□□ 0.82
CDK5RAP1Q96SZ6 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDK5RAP1Q96SZ6 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDK5RAP1Q96SZ6 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.19■□□□□ 0.82
CDK5RAP1Q96SZ6 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDK5RAP1Q96SZ6 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDK5RAP1Q96SZ6 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDK5RAP1Q96SZ6 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.18■□□□□ 0.82
CDK5RAP1Q96SZ6 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.18■□□□□ 0.82
CDK5RAP1Q96SZ6 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDK5RAP1Q96SZ6 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDK5RAP1Q96SZ6 TSPY15P-201ENST00000457163 923 ntBASIC20.18■□□□□ 0.82
CDK5RAP1Q96SZ6 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.18■□□□□ 0.82
CDK5RAP1Q96SZ6 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.18■□□□□ 0.82
CDK5RAP1Q96SZ6 AP000525.1-201ENST00000608286 694 ntBASIC20.18■□□□□ 0.82
CDK5RAP1Q96SZ6 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.18■□□□□ 0.82
CDK5RAP1Q96SZ6 AC011298.2-201ENST00000617989 482 ntBASIC20.18■□□□□ 0.82
CDK5RAP1Q96SZ6 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.18■□□□□ 0.82
CDK5RAP1Q96SZ6 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDK5RAP1Q96SZ6 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.18■□□□□ 0.82
CDK5RAP1Q96SZ6 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDK5RAP1Q96SZ6 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDK5RAP1Q96SZ6 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDK5RAP1Q96SZ6 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDK5RAP1Q96SZ6 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDK5RAP1Q96SZ6 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.18■□□□□ 0.82
CDK5RAP1Q96SZ6 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDK5RAP1Q96SZ6 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDK5RAP1Q96SZ6 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDK5RAP1Q96SZ6 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CDK5RAP1Q96SZ6 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDK5RAP1Q96SZ6 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms