Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
NEK1Q96PY6 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
NEK1Q96PY6 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
NEK1Q96PY6 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC23.05■■□□□ 1.28
NEK1Q96PY6 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
NEK1Q96PY6 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
NEK1Q96PY6 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
NEK1Q96PY6 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
NEK1Q96PY6 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
NEK1Q96PY6 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
NEK1Q96PY6 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
NEK1Q96PY6 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
NEK1Q96PY6 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
NEK1Q96PY6 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC23.04■■□□□ 1.28
NEK1Q96PY6 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
NEK1Q96PY6 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
NEK1Q96PY6 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
NEK1Q96PY6 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
NEK1Q96PY6 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
NEK1Q96PY6 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC23.03■■□□□ 1.28
NEK1Q96PY6 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC23.03■■□□□ 1.28
NEK1Q96PY6 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
NEK1Q96PY6 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
NEK1Q96PY6 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC23.03■■□□□ 1.28
NEK1Q96PY6 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
NEK1Q96PY6 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
NEK1Q96PY6 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
NEK1Q96PY6 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC23.03■■□□□ 1.28
NEK1Q96PY6 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
NEK1Q96PY6 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC23.03■■□□□ 1.28
NEK1Q96PY6 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC23.03■■□□□ 1.28
NEK1Q96PY6 RHOD-202ENST00000532559 538 ntTSL 3 BASIC23.03■■□□□ 1.28
NEK1Q96PY6 AC006058.3-201ENST00000606217 1069 ntBASIC23.03■■□□□ 1.28
NEK1Q96PY6 AL023875.1-201ENST00000640777 796 ntBASIC23.03■■□□□ 1.28
NEK1Q96PY6 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
NEK1Q96PY6 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
NEK1Q96PY6 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
NEK1Q96PY6 ANKRD18DP-204ENST00000455355 1975 ntBASIC23.03■■□□□ 1.28
NEK1Q96PY6 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
NEK1Q96PY6 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
NEK1Q96PY6 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
NEK1Q96PY6 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
NEK1Q96PY6 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NEK1Q96PY6 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NEK1Q96PY6 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NEK1Q96PY6 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
NEK1Q96PY6 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
NEK1Q96PY6 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC23.02■■□□□ 1.28
NEK1Q96PY6 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
NEK1Q96PY6 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NEK1Q96PY6 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
NEK1Q96PY6 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
NEK1Q96PY6 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC23.02■■□□□ 1.28
NEK1Q96PY6 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC23.02■■□□□ 1.28
NEK1Q96PY6 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NEK1Q96PY6 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC23.02■■□□□ 1.28
NEK1Q96PY6 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC23.02■■□□□ 1.28
NEK1Q96PY6 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC23.02■■□□□ 1.28
NEK1Q96PY6 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
NEK1Q96PY6 AC073648.6-201ENST00000641589 218 ntBASIC23.02■■□□□ 1.28
NEK1Q96PY6 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
NEK1Q96PY6 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
NEK1Q96PY6 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
NEK1Q96PY6 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NEK1Q96PY6 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NEK1Q96PY6 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NEK1Q96PY6 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NEK1Q96PY6 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
NEK1Q96PY6 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
NEK1Q96PY6 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NEK1Q96PY6 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
NEK1Q96PY6 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NEK1Q96PY6 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC23.01■■□□□ 1.27
NEK1Q96PY6 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NEK1Q96PY6 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC23.01■■□□□ 1.27
NEK1Q96PY6 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC23.01■■□□□ 1.27
NEK1Q96PY6 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
NEK1Q96PY6 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC23.01■■□□□ 1.27
NEK1Q96PY6 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
NEK1Q96PY6 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NEK1Q96PY6 AC104417.2-201ENST00000562989 1793 ntBASIC23.01■■□□□ 1.27
NEK1Q96PY6 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC23.01■■□□□ 1.27
NEK1Q96PY6 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC23.01■■□□□ 1.27
NEK1Q96PY6 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
NEK1Q96PY6 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC23■■□□□ 1.27
NEK1Q96PY6 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
NEK1Q96PY6 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC23■■□□□ 1.27
NEK1Q96PY6 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NEK1Q96PY6 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NEK1Q96PY6 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
NEK1Q96PY6 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NEK1Q96PY6 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC23■■□□□ 1.27
NEK1Q96PY6 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NEK1Q96PY6 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
NEK1Q96PY6 POU5F1P3-201ENST00000428824 1078 ntBASIC23■■□□□ 1.27
NEK1Q96PY6 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC23■■□□□ 1.27
NEK1Q96PY6 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC23■■□□□ 1.27
NEK1Q96PY6 RN7SL471P-201ENST00000580476 299 ntBASIC23■■□□□ 1.27
NEK1Q96PY6 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NEK1Q96PY6 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms