Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
AP1S3Q96PC3 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC14.68□□□□□ -0.06
AP1S3Q96PC3 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
AP1S3Q96PC3 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC14.68□□□□□ -0.06
AP1S3Q96PC3 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC14.68□□□□□ -0.06
AP1S3Q96PC3 AC012414.1-201ENST00000556676 535 ntBASIC14.68□□□□□ -0.06
AP1S3Q96PC3 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC14.68□□□□□ -0.06
AP1S3Q96PC3 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC14.68□□□□□ -0.06
AP1S3Q96PC3 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC14.68□□□□□ -0.06
AP1S3Q96PC3 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
AP1S3Q96PC3 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC14.68□□□□□ -0.06
AP1S3Q96PC3 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
AP1S3Q96PC3 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
AP1S3Q96PC3 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
AP1S3Q96PC3 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
AP1S3Q96PC3 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
AP1S3Q96PC3 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
AP1S3Q96PC3 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
AP1S3Q96PC3 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
AP1S3Q96PC3 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
AP1S3Q96PC3 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
AP1S3Q96PC3 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.68□□□□□ -0.06
AP1S3Q96PC3 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
AP1S3Q96PC3 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
AP1S3Q96PC3 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
AP1S3Q96PC3 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
AP1S3Q96PC3 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
AP1S3Q96PC3 LBX2-AS1-202ENST00000603175 2083 ntBASIC14.67□□□□□ -0.06
AP1S3Q96PC3 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
AP1S3Q96PC3 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.67□□□□□ -0.06
AP1S3Q96PC3 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
AP1S3Q96PC3 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
AP1S3Q96PC3 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
AP1S3Q96PC3 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
AP1S3Q96PC3 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
AP1S3Q96PC3 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
AP1S3Q96PC3 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
AP1S3Q96PC3 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC14.67□□□□□ -0.06
AP1S3Q96PC3 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
AP1S3Q96PC3 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC14.67□□□□□ -0.06
AP1S3Q96PC3 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
AP1S3Q96PC3 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC14.67□□□□□ -0.06
AP1S3Q96PC3 AL354811.1-201ENST00000610286 706 ntBASIC14.67□□□□□ -0.06
AP1S3Q96PC3 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
AP1S3Q96PC3 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC14.67□□□□□ -0.06
AP1S3Q96PC3 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC14.67□□□□□ -0.06
AP1S3Q96PC3 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
AP1S3Q96PC3 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
AP1S3Q96PC3 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
AP1S3Q96PC3 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
AP1S3Q96PC3 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
AP1S3Q96PC3 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC14.66□□□□□ -0.06
AP1S3Q96PC3 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC14.66□□□□□ -0.06
AP1S3Q96PC3 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
AP1S3Q96PC3 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
AP1S3Q96PC3 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
AP1S3Q96PC3 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
AP1S3Q96PC3 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
AP1S3Q96PC3 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
AP1S3Q96PC3 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
AP1S3Q96PC3 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC14.66□□□□□ -0.06
AP1S3Q96PC3 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC14.66□□□□□ -0.06
AP1S3Q96PC3 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC14.66□□□□□ -0.06
AP1S3Q96PC3 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
AP1S3Q96PC3 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC14.66□□□□□ -0.06
AP1S3Q96PC3 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
AP1S3Q96PC3 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
AP1S3Q96PC3 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
AP1S3Q96PC3 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
AP1S3Q96PC3 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC14.66□□□□□ -0.06
AP1S3Q96PC3 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
AP1S3Q96PC3 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
AP1S3Q96PC3 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
AP1S3Q96PC3 AP001330.3-201ENST00000520123 633 ntBASIC14.66□□□□□ -0.06
AP1S3Q96PC3 AC138907.5-202ENST00000569484 235 ntBASIC14.66□□□□□ -0.06
AP1S3Q96PC3 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
AP1S3Q96PC3 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
AP1S3Q96PC3 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
AP1S3Q96PC3 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
AP1S3Q96PC3 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
AP1S3Q96PC3 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
AP1S3Q96PC3 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
AP1S3Q96PC3 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
AP1S3Q96PC3 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
AP1S3Q96PC3 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
AP1S3Q96PC3 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
AP1S3Q96PC3 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC14.66□□□□□ -0.06
AP1S3Q96PC3 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC14.66□□□□□ -0.06
AP1S3Q96PC3 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP1S3Q96PC3 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
AP1S3Q96PC3 H19-201ENST00000411754 1788 ntTSL 5 BASIC14.65□□□□□ -0.06
AP1S3Q96PC3 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC14.65□□□□□ -0.06
AP1S3Q96PC3 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP1S3Q96PC3 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
AP1S3Q96PC3 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP1S3Q96PC3 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC14.65□□□□□ -0.06
AP1S3Q96PC3 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP1S3Q96PC3 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP1S3Q96PC3 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP1S3Q96PC3 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms