Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.57■□□□□ 0.88
CALR3Q96L12 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.57■□□□□ 0.88
CALR3Q96L12 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CALR3Q96L12 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CALR3Q96L12 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CALR3Q96L12 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CALR3Q96L12 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
CALR3Q96L12 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.57■□□□□ 0.88
CALR3Q96L12 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.57■□□□□ 0.88
CALR3Q96L12 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CALR3Q96L12 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CALR3Q96L12 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CALR3Q96L12 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CALR3Q96L12 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.57■□□□□ 0.88
CALR3Q96L12 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CALR3Q96L12 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
CALR3Q96L12 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.57■□□□□ 0.88
CALR3Q96L12 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CALR3Q96L12 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CALR3Q96L12 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.56■□□□□ 0.88
CALR3Q96L12 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CALR3Q96L12 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CALR3Q96L12 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CALR3Q96L12 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.56■□□□□ 0.88
CALR3Q96L12 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.56■□□□□ 0.88
CALR3Q96L12 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.56■□□□□ 0.88
CALR3Q96L12 AF201337.1-201ENST00000520239 748 ntBASIC20.56■□□□□ 0.88
CALR3Q96L12 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.56■□□□□ 0.88
CALR3Q96L12 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CALR3Q96L12 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.56■□□□□ 0.88
CALR3Q96L12 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CALR3Q96L12 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CALR3Q96L12 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CALR3Q96L12 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.56■□□□□ 0.88
CALR3Q96L12 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CALR3Q96L12 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.55■□□□□ 0.88
CALR3Q96L12 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CALR3Q96L12 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.55■□□□□ 0.88
CALR3Q96L12 AL162430.1-201ENST00000480705 870 ntBASIC20.55■□□□□ 0.88
CALR3Q96L12 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.55■□□□□ 0.88
CALR3Q96L12 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CALR3Q96L12 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.55■□□□□ 0.88
CALR3Q96L12 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CALR3Q96L12 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CALR3Q96L12 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CALR3Q96L12 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.55■□□□□ 0.88
CALR3Q96L12 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CALR3Q96L12 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CALR3Q96L12 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
CALR3Q96L12 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.54■□□□□ 0.88
CALR3Q96L12 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CALR3Q96L12 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CALR3Q96L12 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.54■□□□□ 0.88
CALR3Q96L12 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.54■□□□□ 0.88
CALR3Q96L12 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CALR3Q96L12 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
CALR3Q96L12 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CALR3Q96L12 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.54■□□□□ 0.88
CALR3Q96L12 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.54■□□□□ 0.88
CALR3Q96L12 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CALR3Q96L12 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.54■□□□□ 0.88
CALR3Q96L12 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.54■□□□□ 0.88
CALR3Q96L12 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CALR3Q96L12 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CALR3Q96L12 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CALR3Q96L12 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.54■□□□□ 0.88
CALR3Q96L12 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.54■□□□□ 0.88
CALR3Q96L12 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CALR3Q96L12 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CALR3Q96L12 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CALR3Q96L12 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CALR3Q96L12 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CALR3Q96L12 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CALR3Q96L12 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.53■□□□□ 0.88
CALR3Q96L12 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
CALR3Q96L12 CROCCP3-202ENST00000420820 1947 ntBASIC20.53■□□□□ 0.88
CALR3Q96L12 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CALR3Q96L12 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CALR3Q96L12 NEFHP1-201ENST00000412845 2629 ntBASIC20.53■□□□□ 0.88
CALR3Q96L12 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.53■□□□□ 0.88
CALR3Q96L12 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.53■□□□□ 0.88
CALR3Q96L12 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.53■□□□□ 0.88
CALR3Q96L12 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.53■□□□□ 0.88
CALR3Q96L12 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.53■□□□□ 0.88
CALR3Q96L12 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.53■□□□□ 0.88
CALR3Q96L12 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CALR3Q96L12 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CALR3Q96L12 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CALR3Q96L12 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.53■□□□□ 0.88
CALR3Q96L12 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CALR3Q96L12 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
CALR3Q96L12 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.53■□□□□ 0.88
CALR3Q96L12 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CALR3Q96L12 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CALR3Q96L12 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CALR3Q96L12 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CALR3Q96L12 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CALR3Q96L12 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CALR3Q96L12 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CALR3Q96L12 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms