Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
RTF1Q92541 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC25.42■■□□□ 1.66
RTF1Q92541 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RTF1Q92541 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
RTF1Q92541 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
RTF1Q92541 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RTF1Q92541 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC25.42■■□□□ 1.66
RTF1Q92541 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC25.42■■□□□ 1.66
RTF1Q92541 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
RTF1Q92541 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC25.42■■□□□ 1.66
RTF1Q92541 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC25.42■■□□□ 1.66
RTF1Q92541 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC25.42■■□□□ 1.66
RTF1Q92541 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RTF1Q92541 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC25.42■■□□□ 1.66
RTF1Q92541 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC25.42■■□□□ 1.66
RTF1Q92541 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RTF1Q92541 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC25.42■■□□□ 1.66
RTF1Q92541 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RTF1Q92541 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC25.42■■□□□ 1.66
RTF1Q92541 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
RTF1Q92541 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC25.42■■□□□ 1.66
RTF1Q92541 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RTF1Q92541 AC112907.3-201ENST00000577781 2400 ntBASIC25.42■■□□□ 1.66
RTF1Q92541 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC25.41■■□□□ 1.66
RTF1Q92541 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RTF1Q92541 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RTF1Q92541 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC25.41■■□□□ 1.66
RTF1Q92541 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC25.41■■□□□ 1.66
RTF1Q92541 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RTF1Q92541 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
RTF1Q92541 Z85996.1-201ENST00000494644 937 ntBASIC25.41■■□□□ 1.66
RTF1Q92541 KRT18P21-201ENST00000515767 1272 ntBASIC25.41■■□□□ 1.66
RTF1Q92541 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RTF1Q92541 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC25.41■■□□□ 1.66
RTF1Q92541 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RTF1Q92541 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC25.41■■□□□ 1.66
RTF1Q92541 LINC01568-207ENST00000641790 1380 ntBASIC25.41■■□□□ 1.66
RTF1Q92541 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC25.4■■□□□ 1.66
RTF1Q92541 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC25.4■■□□□ 1.66
RTF1Q92541 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC25.4■■□□□ 1.66
RTF1Q92541 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC25.4■■□□□ 1.66
RTF1Q92541 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC25.4■■□□□ 1.66
RTF1Q92541 LINC01465-201ENST00000408887 1940 ntBASIC25.4■■□□□ 1.66
RTF1Q92541 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC25.4■■□□□ 1.66
RTF1Q92541 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC25.4■■□□□ 1.66
RTF1Q92541 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
RTF1Q92541 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC25.4■■□□□ 1.66
RTF1Q92541 CRYGFP-201ENST00000418459 633 ntBASIC25.4■■□□□ 1.66
RTF1Q92541 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC25.4■■□□□ 1.66
RTF1Q92541 AC008040.2-201ENST00000461049 708 ntBASIC25.4■■□□□ 1.66
RTF1Q92541 SLC25A1P4-201ENST00000567977 778 ntBASIC25.4■■□□□ 1.66
RTF1Q92541 AP005242.2-201ENST00000580065 1175 ntBASIC25.4■■□□□ 1.66
RTF1Q92541 AP000692.2-201ENST00000608391 879 ntBASIC25.4■■□□□ 1.66
RTF1Q92541 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
RTF1Q92541 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
RTF1Q92541 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
RTF1Q92541 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC25.4■■□□□ 1.66
RTF1Q92541 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC25.4■■□□□ 1.66
RTF1Q92541 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
RTF1Q92541 LINC01521-201ENST00000504184 1943 ntBASIC25.39■■□□□ 1.66
RTF1Q92541 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
RTF1Q92541 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
RTF1Q92541 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC25.39■■□□□ 1.66
RTF1Q92541 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
RTF1Q92541 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC25.39■■□□□ 1.66
RTF1Q92541 AC010947.1-201ENST00000623454 693 ntBASIC25.39■■□□□ 1.66
RTF1Q92541 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.65
RTF1Q92541 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
RTF1Q92541 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
RTF1Q92541 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC25.39■■□□□ 1.65
RTF1Q92541 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
RTF1Q92541 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
RTF1Q92541 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
RTF1Q92541 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC25.39■■□□□ 1.65
RTF1Q92541 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC25.38■■□□□ 1.65
RTF1Q92541 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC25.38■■□□□ 1.65
RTF1Q92541 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC25.38■■□□□ 1.65
RTF1Q92541 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
RTF1Q92541 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
RTF1Q92541 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC25.38■■□□□ 1.65
RTF1Q92541 FAM207BP-201ENST00000447172 505 ntBASIC25.38■■□□□ 1.65
RTF1Q92541 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC25.38■■□□□ 1.65
RTF1Q92541 PPOX-219ENST00000544598 813 ntTSL 2 BASIC25.38■■□□□ 1.65
RTF1Q92541 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC25.38■■□□□ 1.65
RTF1Q92541 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
RTF1Q92541 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC25.38■■□□□ 1.65
RTF1Q92541 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
RTF1Q92541 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC25.37■■□□□ 1.65
RTF1Q92541 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC25.37■■□□□ 1.65
RTF1Q92541 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
RTF1Q92541 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC25.37■■□□□ 1.65
RTF1Q92541 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
RTF1Q92541 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
RTF1Q92541 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
RTF1Q92541 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
RTF1Q92541 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC25.37■■□□□ 1.65
RTF1Q92541 AC091390.4-202ENST00000476426 537 ntBASIC25.37■■□□□ 1.65
RTF1Q92541 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC25.37■■□□□ 1.65
RTF1Q92541 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
RTF1Q92541 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC25.37■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms