Protein–RNA interactions for Protein: Q92538

GBF1, Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1, humanhuman

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GBF1Q92538 CR769767.2-201ENST00000622735 460 ntBASIC20.93■□□□□ 0.94
GBF1Q92538 KRT8P8-201ENST00000434750 1448 ntBASIC20.93■□□□□ 0.94
GBF1Q92538 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
GBF1Q92538 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.93■□□□□ 0.94
GBF1Q92538 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
GBF1Q92538 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
GBF1Q92538 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
GBF1Q92538 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
GBF1Q92538 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.93■□□□□ 0.94
GBF1Q92538 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GBF1Q92538 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC20.92■□□□□ 0.94
GBF1Q92538 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC20.92■□□□□ 0.94
GBF1Q92538 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
GBF1Q92538 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.92■□□□□ 0.94
GBF1Q92538 MIR3180-1-201ENST00000580374 94 ntBASIC20.92■□□□□ 0.94
GBF1Q92538 MIR3180-3-201ENST00000584616 94 ntBASIC20.92■□□□□ 0.94
GBF1Q92538 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.92■□□□□ 0.94
GBF1Q92538 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
GBF1Q92538 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
GBF1Q92538 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GBF1Q92538 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GBF1Q92538 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GBF1Q92538 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GBF1Q92538 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
GBF1Q92538 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC20.92■□□□□ 0.94
GBF1Q92538 AL645929.1-201ENST00000420084 975 ntBASIC20.92■□□□□ 0.94
GBF1Q92538 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC20.92■□□□□ 0.94
GBF1Q92538 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC20.92■□□□□ 0.94
GBF1Q92538 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.92■□□□□ 0.94
GBF1Q92538 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
GBF1Q92538 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.92■□□□□ 0.94
GBF1Q92538 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GBF1Q92538 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
GBF1Q92538 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
GBF1Q92538 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
GBF1Q92538 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
GBF1Q92538 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.91■□□□□ 0.94
GBF1Q92538 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
GBF1Q92538 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
GBF1Q92538 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC20.91■□□□□ 0.94
GBF1Q92538 AC079781.3-201ENST00000449110 356 ntBASIC20.91■□□□□ 0.94
GBF1Q92538 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC20.91■□□□□ 0.94
GBF1Q92538 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.91■□□□□ 0.94
GBF1Q92538 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
GBF1Q92538 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC20.91■□□□□ 0.94
GBF1Q92538 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
GBF1Q92538 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
GBF1Q92538 MIR3652-201ENST00000579335 131 ntBASIC20.91■□□□□ 0.94
GBF1Q92538 AL671883.3-201ENST00000603274 991 ntBASIC20.91■□□□□ 0.94
GBF1Q92538 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
GBF1Q92538 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.91■□□□□ 0.94
GBF1Q92538 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.91■□□□□ 0.94
GBF1Q92538 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.91■□□□□ 0.94
GBF1Q92538 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC20.91■□□□□ 0.94
GBF1Q92538 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
GBF1Q92538 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.91■□□□□ 0.94
GBF1Q92538 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
GBF1Q92538 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
GBF1Q92538 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
GBF1Q92538 AL137060.1-201ENST00000618151 2648 ntBASIC20.9■□□□□ 0.94
GBF1Q92538 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
GBF1Q92538 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC20.9■□□□□ 0.94
GBF1Q92538 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.9■□□□□ 0.94
GBF1Q92538 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
GBF1Q92538 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GBF1Q92538 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.9■□□□□ 0.94
GBF1Q92538 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
GBF1Q92538 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.9■□□□□ 0.94
GBF1Q92538 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
GBF1Q92538 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.9■□□□□ 0.94
GBF1Q92538 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.9■□□□□ 0.94
GBF1Q92538 LINC01311-201ENST00000565162 1445 ntBASIC20.9■□□□□ 0.94
GBF1Q92538 TMEM179-206ENST00000616017 1645 ntBASIC20.9■□□□□ 0.94
GBF1Q92538 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.9■□□□□ 0.94
GBF1Q92538 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.9■□□□□ 0.94
GBF1Q92538 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.9■□□□□ 0.94
GBF1Q92538 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GBF1Q92538 KRT17P6-201ENST00000453795 1220 ntBASIC20.9■□□□□ 0.94
GBF1Q92538 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC20.9■□□□□ 0.94
GBF1Q92538 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
GBF1Q92538 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GBF1Q92538 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
GBF1Q92538 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
GBF1Q92538 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
GBF1Q92538 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.94
GBF1Q92538 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
GBF1Q92538 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
GBF1Q92538 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.89■□□□□ 0.93
GBF1Q92538 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.89■□□□□ 0.93
GBF1Q92538 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
GBF1Q92538 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
GBF1Q92538 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.89■□□□□ 0.93
GBF1Q92538 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.89■□□□□ 0.93
GBF1Q92538 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
GBF1Q92538 AL031008.1-201ENST00000619963 541 ntBASIC20.89■□□□□ 0.93
GBF1Q92538 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20.89■□□□□ 0.93
GBF1Q92538 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.89■□□□□ 0.93
GBF1Q92538 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
GBF1Q92538 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
GBF1Q92538 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms