Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
SLC44A1Q8WWI5 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SLC44A1Q8WWI5 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC44A1Q8WWI5 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SLC44A1Q8WWI5 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.5■□□□□ 0.71
SLC44A1Q8WWI5 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC44A1Q8WWI5 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC44A1Q8WWI5 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.5■□□□□ 0.71
SLC44A1Q8WWI5 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC44A1Q8WWI5 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC44A1Q8WWI5 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC44A1Q8WWI5 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC44A1Q8WWI5 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC44A1Q8WWI5 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
SLC44A1Q8WWI5 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC44A1Q8WWI5 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
SLC44A1Q8WWI5 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC44A1Q8WWI5 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
SLC44A1Q8WWI5 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
SLC44A1Q8WWI5 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.5■□□□□ 0.71
SLC44A1Q8WWI5 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.5■□□□□ 0.71
SLC44A1Q8WWI5 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.5■□□□□ 0.71
SLC44A1Q8WWI5 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.5■□□□□ 0.71
SLC44A1Q8WWI5 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC44A1Q8WWI5 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SLC44A1Q8WWI5 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.5■□□□□ 0.71
SLC44A1Q8WWI5 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SLC44A1Q8WWI5 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.5■□□□□ 0.71
SLC44A1Q8WWI5 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC44A1Q8WWI5 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC44A1Q8WWI5 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.49■□□□□ 0.71
SLC44A1Q8WWI5 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SLC44A1Q8WWI5 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.49■□□□□ 0.71
SLC44A1Q8WWI5 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.49■□□□□ 0.71
SLC44A1Q8WWI5 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
SLC44A1Q8WWI5 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC44A1Q8WWI5 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC44A1Q8WWI5 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
SLC44A1Q8WWI5 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
SLC44A1Q8WWI5 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC44A1Q8WWI5 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC44A1Q8WWI5 LSM12P1-201ENST00000411836 588 ntBASIC19.49■□□□□ 0.71
SLC44A1Q8WWI5 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
SLC44A1Q8WWI5 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.49■□□□□ 0.71
SLC44A1Q8WWI5 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.49■□□□□ 0.71
SLC44A1Q8WWI5 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SLC44A1Q8WWI5 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.49■□□□□ 0.71
SLC44A1Q8WWI5 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.49■□□□□ 0.71
SLC44A1Q8WWI5 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.49■□□□□ 0.71
SLC44A1Q8WWI5 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC44A1Q8WWI5 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC44A1Q8WWI5 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC44A1Q8WWI5 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SLC44A1Q8WWI5 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC44A1Q8WWI5 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC44A1Q8WWI5 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC44A1Q8WWI5 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SLC44A1Q8WWI5 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.49■□□□□ 0.71
SLC44A1Q8WWI5 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC44A1Q8WWI5 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.48■□□□□ 0.71
SLC44A1Q8WWI5 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
SLC44A1Q8WWI5 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC44A1Q8WWI5 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
SLC44A1Q8WWI5 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.48■□□□□ 0.71
SLC44A1Q8WWI5 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.48■□□□□ 0.71
SLC44A1Q8WWI5 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
SLC44A1Q8WWI5 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.48■□□□□ 0.71
SLC44A1Q8WWI5 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SLC44A1Q8WWI5 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC44A1Q8WWI5 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
SLC44A1Q8WWI5 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC44A1Q8WWI5 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.48■□□□□ 0.71
SLC44A1Q8WWI5 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC44A1Q8WWI5 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.48■□□□□ 0.71
SLC44A1Q8WWI5 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.48■□□□□ 0.71
SLC44A1Q8WWI5 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.48■□□□□ 0.71
SLC44A1Q8WWI5 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC44A1Q8WWI5 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC44A1Q8WWI5 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
SLC44A1Q8WWI5 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.47■□□□□ 0.71
SLC44A1Q8WWI5 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC44A1Q8WWI5 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC44A1Q8WWI5 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.47■□□□□ 0.71
SLC44A1Q8WWI5 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
SLC44A1Q8WWI5 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SLC44A1Q8WWI5 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.47■□□□□ 0.71
SLC44A1Q8WWI5 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.47■□□□□ 0.71
SLC44A1Q8WWI5 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
SLC44A1Q8WWI5 AC005181.1-201ENST00000604782 1256 ntBASIC19.47■□□□□ 0.71
SLC44A1Q8WWI5 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.47■□□□□ 0.71
SLC44A1Q8WWI5 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SLC44A1Q8WWI5 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SLC44A1Q8WWI5 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC44A1Q8WWI5 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SLC44A1Q8WWI5 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC44A1Q8WWI5 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC44A1Q8WWI5 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC44A1Q8WWI5 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC44A1Q8WWI5 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC44A1Q8WWI5 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms