Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.66■□□□□ 0.42
RNF138Q8WVD3 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF138Q8WVD3 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF138Q8WVD3 LINC01465-201ENST00000408887 1940 ntBASIC17.65■□□□□ 0.42
RNF138Q8WVD3 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RNF138Q8WVD3 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.65■□□□□ 0.42
RNF138Q8WVD3 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF138Q8WVD3 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.65■□□□□ 0.42
RNF138Q8WVD3 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
RNF138Q8WVD3 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF138Q8WVD3 AL596275.1-201ENST00000423464 877 ntBASIC17.65■□□□□ 0.42
RNF138Q8WVD3 SNORA78-201ENST00000459373 127 ntBASIC17.65■□□□□ 0.42
RNF138Q8WVD3 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.65■□□□□ 0.42
RNF138Q8WVD3 AC026471.5-201ENST00000615068 467 ntBASIC17.65■□□□□ 0.42
RNF138Q8WVD3 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.65■□□□□ 0.42
RNF138Q8WVD3 RCC2P6-201ENST00000526625 1557 ntBASIC17.65■□□□□ 0.42
RNF138Q8WVD3 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF138Q8WVD3 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF138Q8WVD3 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF138Q8WVD3 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.64■□□□□ 0.42
RNF138Q8WVD3 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.64■□□□□ 0.42
RNF138Q8WVD3 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.64■□□□□ 0.42
RNF138Q8WVD3 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF138Q8WVD3 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
RNF138Q8WVD3 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF138Q8WVD3 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.64■□□□□ 0.41
RNF138Q8WVD3 TSPY7P-201ENST00000431358 1114 ntBASIC17.64■□□□□ 0.41
RNF138Q8WVD3 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF138Q8WVD3 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.64■□□□□ 0.41
RNF138Q8WVD3 B3GAT3P1-201ENST00000471720 806 ntBASIC17.64■□□□□ 0.41
RNF138Q8WVD3 AC011506.1-201ENST00000474329 610 ntBASIC17.64■□□□□ 0.41
RNF138Q8WVD3 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.64■□□□□ 0.41
RNF138Q8WVD3 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.64■□□□□ 0.41
RNF138Q8WVD3 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.64■□□□□ 0.41
RNF138Q8WVD3 MIR4785-201ENST00000585005 73 ntBASIC17.64■□□□□ 0.41
RNF138Q8WVD3 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.64■□□□□ 0.41
RNF138Q8WVD3 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.64■□□□□ 0.41
RNF138Q8WVD3 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF138Q8WVD3 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
RNF138Q8WVD3 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.64■□□□□ 0.41
RNF138Q8WVD3 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.64■□□□□ 0.41
RNF138Q8WVD3 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
RNF138Q8WVD3 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
RNF138Q8WVD3 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
RNF138Q8WVD3 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF138Q8WVD3 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF138Q8WVD3 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF138Q8WVD3 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.63■□□□□ 0.41
RNF138Q8WVD3 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.63■□□□□ 0.41
RNF138Q8WVD3 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF138Q8WVD3 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.63■□□□□ 0.41
RNF138Q8WVD3 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.63■□□□□ 0.41
RNF138Q8WVD3 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
RNF138Q8WVD3 MIR6786-201ENST00000616843 113 ntBASIC17.63■□□□□ 0.41
RNF138Q8WVD3 SDHAP1-207ENST00000440850 2000 ntBASIC17.63■□□□□ 0.41
RNF138Q8WVD3 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF138Q8WVD3 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF138Q8WVD3 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RNF138Q8WVD3 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RNF138Q8WVD3 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
RNF138Q8WVD3 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RNF138Q8WVD3 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF138Q8WVD3 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF138Q8WVD3 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF138Q8WVD3 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF138Q8WVD3 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
RNF138Q8WVD3 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF138Q8WVD3 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.62■□□□□ 0.41
RNF138Q8WVD3 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF138Q8WVD3 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.62■□□□□ 0.41
RNF138Q8WVD3 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
RNF138Q8WVD3 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
RNF138Q8WVD3 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.62■□□□□ 0.41
RNF138Q8WVD3 AC008040.2-201ENST00000461049 708 ntBASIC17.62■□□□□ 0.41
RNF138Q8WVD3 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.62■□□□□ 0.41
RNF138Q8WVD3 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RNF138Q8WVD3 AP003071.4-201ENST00000562276 1284 ntBASIC17.62■□□□□ 0.41
RNF138Q8WVD3 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.62■□□□□ 0.41
RNF138Q8WVD3 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.62■□□□□ 0.41
RNF138Q8WVD3 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.62■□□□□ 0.41
RNF138Q8WVD3 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.62■□□□□ 0.41
RNF138Q8WVD3 REXO1L10P-201ENST00000615707 1290 ntBASIC17.62■□□□□ 0.41
RNF138Q8WVD3 AC130371.2-201ENST00000619443 611 ntBASIC17.62■□□□□ 0.41
RNF138Q8WVD3 REXO1L12P-201ENST00000622156 912 ntBASIC17.62■□□□□ 0.41
RNF138Q8WVD3 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.62■□□□□ 0.41
RNF138Q8WVD3 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF138Q8WVD3 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF138Q8WVD3 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF138Q8WVD3 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.62■□□□□ 0.41
RNF138Q8WVD3 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.62■□□□□ 0.41
RNF138Q8WVD3 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF138Q8WVD3 FSCN1P1-201ENST00000568912 1481 ntBASIC17.62■□□□□ 0.41
RNF138Q8WVD3 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.62■□□□□ 0.41
RNF138Q8WVD3 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF138Q8WVD3 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RNF138Q8WVD3 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.62■□□□□ 0.41
RNF138Q8WVD3 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.62■□□□□ 0.41
RNF138Q8WVD3 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF138Q8WVD3 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.61■□□□□ 0.41
RNF138Q8WVD3 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms