Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
SIMC1Q8NDZ2 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
SIMC1Q8NDZ2 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SIMC1Q8NDZ2 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.52
SIMC1Q8NDZ2 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SIMC1Q8NDZ2 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SIMC1Q8NDZ2 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SIMC1Q8NDZ2 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SIMC1Q8NDZ2 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SIMC1Q8NDZ2 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.32■□□□□ 0.52
SIMC1Q8NDZ2 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SIMC1Q8NDZ2 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SIMC1Q8NDZ2 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SIMC1Q8NDZ2 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SIMC1Q8NDZ2 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SIMC1Q8NDZ2 POU5F1P3-201ENST00000428824 1078 ntBASIC18.32■□□□□ 0.52
SIMC1Q8NDZ2 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SIMC1Q8NDZ2 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.32■□□□□ 0.52
SIMC1Q8NDZ2 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.32■□□□□ 0.52
SIMC1Q8NDZ2 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SIMC1Q8NDZ2 AL121829.2-201ENST00000620908 328 ntBASIC18.32■□□□□ 0.52
SIMC1Q8NDZ2 AL121906.2-201ENST00000621597 723 ntBASIC18.32■□□□□ 0.52
SIMC1Q8NDZ2 AC073648.6-201ENST00000641589 218 ntBASIC18.32■□□□□ 0.52
SIMC1Q8NDZ2 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SIMC1Q8NDZ2 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SIMC1Q8NDZ2 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SIMC1Q8NDZ2 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SIMC1Q8NDZ2 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SIMC1Q8NDZ2 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.32■□□□□ 0.52
SIMC1Q8NDZ2 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SIMC1Q8NDZ2 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SIMC1Q8NDZ2 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.32■□□□□ 0.52
SIMC1Q8NDZ2 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SIMC1Q8NDZ2 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
SIMC1Q8NDZ2 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SIMC1Q8NDZ2 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SIMC1Q8NDZ2 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.31■□□□□ 0.52
SIMC1Q8NDZ2 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.31■□□□□ 0.52
SIMC1Q8NDZ2 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SIMC1Q8NDZ2 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SIMC1Q8NDZ2 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SIMC1Q8NDZ2 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.31■□□□□ 0.52
SIMC1Q8NDZ2 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SIMC1Q8NDZ2 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SIMC1Q8NDZ2 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SIMC1Q8NDZ2 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.31■□□□□ 0.52
SIMC1Q8NDZ2 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
SIMC1Q8NDZ2 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.31■□□□□ 0.52
SIMC1Q8NDZ2 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.31■□□□□ 0.52
SIMC1Q8NDZ2 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SIMC1Q8NDZ2 MTDHP1-201ENST00000605323 784 ntBASIC18.31■□□□□ 0.52
SIMC1Q8NDZ2 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SIMC1Q8NDZ2 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.31■□□□□ 0.52
SIMC1Q8NDZ2 AC116562.4-201ENST00000641316 2276 ntBASIC18.31■□□□□ 0.52
SIMC1Q8NDZ2 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SIMC1Q8NDZ2 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SIMC1Q8NDZ2 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SIMC1Q8NDZ2 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SIMC1Q8NDZ2 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.31■□□□□ 0.52
SIMC1Q8NDZ2 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SIMC1Q8NDZ2 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.31■□□□□ 0.52
SIMC1Q8NDZ2 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SIMC1Q8NDZ2 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SIMC1Q8NDZ2 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SIMC1Q8NDZ2 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SIMC1Q8NDZ2 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SIMC1Q8NDZ2 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SIMC1Q8NDZ2 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.31■□□□□ 0.52
SIMC1Q8NDZ2 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SIMC1Q8NDZ2 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SIMC1Q8NDZ2 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SIMC1Q8NDZ2 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
SIMC1Q8NDZ2 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
SIMC1Q8NDZ2 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SIMC1Q8NDZ2 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SIMC1Q8NDZ2 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SIMC1Q8NDZ2 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SIMC1Q8NDZ2 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
SIMC1Q8NDZ2 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SIMC1Q8NDZ2 AC128676.1-201ENST00000454392 318 ntBASIC18.3■□□□□ 0.52
SIMC1Q8NDZ2 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.3■□□□□ 0.52
SIMC1Q8NDZ2 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
SIMC1Q8NDZ2 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.3■□□□□ 0.52
SIMC1Q8NDZ2 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SIMC1Q8NDZ2 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.3■□□□□ 0.52
SIMC1Q8NDZ2 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.3■□□□□ 0.52
SIMC1Q8NDZ2 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SIMC1Q8NDZ2 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SIMC1Q8NDZ2 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.3■□□□□ 0.52
SIMC1Q8NDZ2 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
SIMC1Q8NDZ2 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SIMC1Q8NDZ2 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SIMC1Q8NDZ2 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SIMC1Q8NDZ2 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SIMC1Q8NDZ2 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SIMC1Q8NDZ2 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SIMC1Q8NDZ2 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SIMC1Q8NDZ2 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SIMC1Q8NDZ2 KRT17P3-201ENST00000420566 1262 ntBASIC18.29■□□□□ 0.52
SIMC1Q8NDZ2 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms